Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M15
         (311 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...   113   6e-28
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    43   1e-06
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    43   1e-06
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   1.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    20   8.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   8.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   8.0  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score =  113 bits (271), Expect = 6e-28
 Identities = 53/84 (63%), Positives = 65/84 (77%)
 Frame = +1

Query: 58  DFIGKKYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTE 237
           DF+GK+YK+ +SENFDDFMKALGVG++TRK  ++V+P VEL +    Y   T+S FK TE
Sbjct: 3   DFLGKRYKLYSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNTE 62

Query: 238 MKFKPGEEFEEERADGVKVKSV*T 309
           +KFK GEEFEEE  DG KVKSV T
Sbjct: 63  IKFKLGEEFEEETVDGRKVKSVCT 86


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 42.7 bits (96), Expect = 1e-06
 Identities = 23/66 (34%), Positives = 32/66 (48%)
 Frame = +1

Query: 73  KYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKP 252
           K++  +  NF++F K LG   +         P+ EL K GDE+ F +SS   T    FK 
Sbjct: 5   KFQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYTKTFKM 63

Query: 253 GEEFEE 270
              FEE
Sbjct: 64  NVPFEE 69


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 42.7 bits (96), Expect = 1e-06
 Identities = 23/66 (34%), Positives = 32/66 (48%)
 Frame = +1

Query: 73  KYKMTTSENFDDFMKALGVGLITRKAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKP 252
           K++  +  NF++F K LG   +         P+ EL K GDE+ F +SS   T    FK 
Sbjct: 7   KFQFVSQNNFEEFAKVLGDQNLVNTVLQP-RPSFELSKNGDEWTFTSSSGDNTYTKTFKM 65

Query: 253 GEEFEE 270
              FEE
Sbjct: 66  NVPFEE 71


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 242 FISVVLNVEEVTKLYSSPSLRSSTV 168
           FIS+++  +E+  + +SP L + T+
Sbjct: 9   FISLIILNDEIYNIIASPQLNNPTL 33


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 10/41 (24%), Positives = 22/41 (53%)
 Frame = -1

Query: 194 SPSLRSSTVGVTALAALRVISPTPSAFMKSSKFSDVVILYF 72
           S S    T+G++AL ++ V   T    +  ++ + ++ LY+
Sbjct: 239 SESGEKVTLGISALLSMTVFLMTIRESLPPTEKTPLISLYY 279


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 223 FKTTEMKFKPGEEFEEER 276
           F+TT+     G  F+EER
Sbjct: 285 FRTTKSSKMFGSRFDEER 302


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 12/53 (22%), Positives = 21/53 (39%)
 Frame = +1

Query: 145 KAANAVTPTVELRKEGDEYNFVTSSTFKTTEMKFKPGEEFEEERADGVKVKSV 303
           K +   TP ++   E  EY+ + +           P  E EEE    + + S+
Sbjct: 283 KCSMITTPEIKKEVEDMEYDDIKTELSTGMNDDIPPETEEEEENDKKLDLDSI 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,504
Number of Sequences: 438
Number of extensions: 1373
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6595479
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)