Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M14
         (369 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217400-1|AAF73385.1|  237|Drosophila melanogaster unknown prot...    31   0.63 
AE014296-1030|AAF50732.1|  738|Drosophila melanogaster CG10486-P...    29   2.5  
BT030296-1|ABN49435.1|   87|Drosophila melanogaster IP18705p pro...    27   5.8  
BT030275-1|ABN49414.1|   87|Drosophila melanogaster IP18505p pro...    27   5.8  

>AF217400-1|AAF73385.1|  237|Drosophila melanogaster unknown
           protein.
          Length = 237

 Score = 30.7 bits (66), Expect = 0.63
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 178 PHLYVHFYILFTIFFKHVLPRLATFFLNYMFHYII 282
           P L +  Y +FT+ F  +LP L   F +Y+ ++II
Sbjct: 151 PQLGIQQYSIFTVKFNRLLPFLVPLFGSYICYFII 185


>AE014296-1030|AAF50732.1|  738|Drosophila melanogaster CG10486-PA
           protein.
          Length = 738

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +3

Query: 186 IRTFLYIVYNFF*TCTATLGNLFFKLYVPLYYLNIP 293
           IR FL+++   F T    LG +F  L  P YY  +P
Sbjct: 128 IRLFLFMIPFCFITAFVYLGQIFMCLTPPKYYCYVP 163


>BT030296-1|ABN49435.1|   87|Drosophila melanogaster IP18705p
           protein.
          Length = 87

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
 Frame = +3

Query: 120 FFFSFFLQQNVQILFFIPITAFIRTFLYIVY------NFF*TCT-ATLGNL--FFKLYVP 272
           FF S FL  +  ++ F+ I   +   +++++      N+  +C+  TL ++  FF L   
Sbjct: 4   FFGSIFLMMSSILIEFLVIIYLVTDIIHLIFCSPFIINYALSCSFCTLESIPVFFTLAFS 63

Query: 273 LYYLNIPFIPKQKCLW 320
           LY+  + F   ++ LW
Sbjct: 64  LYFWIVAFFYWRRLLW 79


>BT030275-1|ABN49414.1|   87|Drosophila melanogaster IP18505p
           protein.
          Length = 87

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
 Frame = +3

Query: 120 FFFSFFLQQNVQILFFIPITAFIRTFLYIVY------NFF*TCT-ATLGNL--FFKLYVP 272
           FF S FL  +  ++ F+ I   +   +++++      N+  +C+  TL ++  FF L   
Sbjct: 4   FFGSIFLMMSSILIEFLVIIYLVTDIIHLIFCSPFIINYALSCSFCTLESIPVFFTLAFS 63

Query: 273 LYYLNIPFIPKQKCLW 320
           LY+  + F   ++ LW
Sbjct: 64  LYFWIVAFFYWRRLLW 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,040,554
Number of Sequences: 53049
Number of extensions: 231586
Number of successful extensions: 564
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)