Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M12
(425 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5MCG5 Cluster: Mitochondrial ATP synthase beta subunit... 96 2e-19
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 93 2e-18
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 81 9e-15
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 80 2e-14
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 78 7e-14
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 75 5e-13
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 68 9e-11
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 64 2e-09
UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP synt... 58 8e-08
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 58 8e-08
UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1; Le... 58 1e-07
UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP synt... 54 9e-07
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 53 2e-06
UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatu... 52 4e-06
UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3; ... 44 0.001
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 43 0.003
UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3; Gammaprot... 43 0.003
UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12; Candid... 41 0.012
UniRef50_A4FZW9 Cluster: ABC transporter related; n=3; Methanoco... 33 1.9
UniRef50_UPI0000F1EC09 Cluster: PREDICTED: similar to polyprotei... 33 3.3
UniRef50_UPI0000F1E41E Cluster: PREDICTED: similar to polyprotei... 33 3.3
UniRef50_A2ENI3 Cluster: Putative uncharacterized protein; n=2; ... 33 3.3
UniRef50_UPI00006CBEC0 Cluster: hypothetical protein TTHERM_0030... 32 4.3
UniRef50_Q14VU5 Cluster: ORF13; n=1; Ranid herpesvirus 1|Rep: OR... 32 5.7
UniRef50_Q5PAK8 Cluster: Ankyrin; n=1; Anaplasma marginale str. ... 32 5.7
UniRef50_A0BUK6 Cluster: Chromosome undetermined scaffold_13, wh... 32 5.7
UniRef50_A1GDC5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.9
UniRef50_Q9LCZ9 Cluster: Photoassimilate-responsive protein PAR-... 31 9.9
UniRef50_Q29G81 Cluster: GA13753-PA; n=1; Drosophila pseudoobscu... 31 9.9
>UniRef50_Q5MCG5 Cluster: Mitochondrial ATP synthase beta subunit;
n=1; Mesenchytraeus solifugus|Rep: Mitochondrial ATP
synthase beta subunit - Mesenchytraeus solifugus
(glacier ice worm)
Length = 136
Score = 96.3 bits (229), Expect = 2e-19
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +3
Query: 264 FEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
F+D LPPILNALEV NR PRL+LEVAQHLGENTVRTIAMDGTEGLVRGQ D+
Sbjct: 74 FDDELPPILNALEVANRKPRLILEVAQHLGENTVRTIAMDGTEGLVRGQVCTDT 127
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 93.1 bits (221), Expect = 2e-18
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +3
Query: 264 FEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
F++ LPPILNALEVQ R RLVLEVAQHLGE+TVRTIAMDGTEGLVRGQ V DS
Sbjct: 75 FDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDS 128
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 81.0 bits (191), Expect = 9e-15
Identities = 40/53 (75%), Positives = 42/53 (79%)
Frame = +3
Query: 267 EDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
E LP ILNALE N RLVLEVAQHLGEN+VRTIAMD TEGLVRGQ V D+
Sbjct: 52 EGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGLVRGQKVADT 104
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 79.8 bits (188), Expect = 2e-14
Identities = 38/53 (71%), Positives = 44/53 (83%)
Frame = +3
Query: 267 EDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
+ LP ILNALE++ +LVLEVAQHLGENTVRTIAMDGTEGLVRG+ V D+
Sbjct: 60 QSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDT 112
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 78.2 bits (184), Expect = 7e-14
Identities = 36/54 (66%), Positives = 44/54 (81%)
Frame = +3
Query: 264 FEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
FE+ LPP+L ALE +N+ +VLEVAQHLGEN VRTI+MD T+GLVRGQ V D+
Sbjct: 25 FEEKLPPLLTALETKNQDATVVLEVAQHLGENVVRTISMDTTDGLVRGQEVVDT 78
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 75.4 bits (177), Expect = 5e-13
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +3
Query: 267 EDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPV 416
++ LPPI+ +LEVQ+ RLVLEV+ HLG+N VRTIAMDGTEGLVRG+ V
Sbjct: 104 QEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKV 153
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 67.7 bits (158), Expect = 9e-11
Identities = 35/54 (64%), Positives = 39/54 (72%)
Frame = +3
Query: 264 FEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
FE +LP ILNAL VQN LVLEVAQ +GE VR IAMD T+GLVRG V D+
Sbjct: 31 FEGDLPFILNALHVQNGDHTLVLEVAQEIGERQVRCIAMDTTDGLVRGTEVRDT 84
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 63.7 bits (148), Expect = 2e-09
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +3
Query: 267 EDNLPPILNALEVQNRSPRLV-LEVAQHLGENTVRTIAMDGTEGLVRGQPVHD 422
+ +LP ILNALEV + ++V LE QHLGE+TVRTIAM+GTEGL RG V D
Sbjct: 23 KSHLPKILNALEVTKENGQVVILECQQHLGEDTVRTIAMEGTEGLQRGMDVTD 75
>UniRef50_Q9RQ79 Cluster: Beta subunit of membrane-bound ATP
synthase; n=8; cellular organisms|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 58.0 bits (134), Expect = 8e-08
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +3
Query: 267 EDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHD 422
++++P I NALEVQN+ +L+LEV Q LG VRTIAM ++GL RG V+D
Sbjct: 20 QNSVPKIYNALEVQNKYHKLILEVQQQLGAGIVRTIAMGSSDGLKRGLIVND 71
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 58.0 bits (134), Expect = 8e-08
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = +3
Query: 276 LPPILNALEVQNRS-PRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPV 416
LP I +ALE++ + +L++EV QH+GENTVRT+AMD T+GL RG V
Sbjct: 29 LPSIHDALEIKRHNGKKLIVEVQQHIGENTVRTVAMDSTDGLQRGMKV 76
>UniRef50_A6DUD8 Cluster: F0F1 ATP synthase subunit beta; n=1;
Lentisphaera araneosa HTCC2155|Rep: F0F1 ATP synthase
subunit beta - Lentisphaera araneosa HTCC2155
Length = 161
Score = 57.6 bits (133), Expect = 1e-07
Identities = 33/55 (60%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Frame = +3
Query: 276 LPPILNALEVQNRS-----PRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
+P I NAL+V N S LVLEVAQHLGE VRTIA+D TEGL RG V D+
Sbjct: 26 IPGIFNALKVTNPSINDQEGNLVLEVAQHLGEGVVRTIALDSTEGLHRGAVVTDT 80
>UniRef50_Q9RQ76 Cluster: Beta subunit of membrane-bound ATP
synthase; n=16; Gammaproteobacteria|Rep: Beta subunit of
membrane-bound ATP synthase - Buchnera aphidicola
Length = 147
Score = 54.4 bits (125), Expect = 9e-07
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +3
Query: 270 DNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHD 422
+++P I NAL VQNR+ +++LEV Q G VRTIAM ++GL RG V D
Sbjct: 21 NSVPKIYNALSVQNRNQKIILEVQQQPGSGVVRTIAMGASDGLSRGLSVLD 71
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 53.2 bits (122), Expect = 2e-06
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +3
Query: 267 EDNLPPILNALEVQN--RSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
E +LP I +AL V N +L+LEV Q +G+N VRT+AMD T+GLVRG V ++
Sbjct: 23 EGDLPDIYDALVVINPQTGKKLILEVEQLIGDNIVRTVAMDSTDGLVRGLEVENT 77
>UniRef50_Q1NYL2 Cluster: ATP synthase beta chain; n=1; Candidatus
Sulcia muelleri str. Hc (Homalodisca coagulata)|Rep: ATP
synthase beta chain - Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)
Length = 129
Score = 52.4 bits (120), Expect = 4e-06
Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +3
Query: 273 NLPPILNALEVQN-RSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPV 416
+LP I ++LEV N + +++LEV QH+GE TVR I+MD T+GL RGQ V
Sbjct: 30 SLPMIYDSLEVFNPKGNQIILEVQQHIGECTVRCISMDITDGLKRGQDV 78
>UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Oceanicola batsensis HTCC2597
Length = 620
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/61 (34%), Positives = 38/61 (62%)
Frame = -1
Query: 410 LSAH*PLGTVHSNGSDRVFTQVLRDLQHESR*AVLYLECIQNGRKVVFELYVNHSTDNCN 231
L+A G VH +G+ V T+VLR Q++ V+ +C+++ R+V+ EL+V++ D+
Sbjct: 414 LAADQTFGRVHRDGAHGVLTKVLRHFQNQLGAVVVGGQCVEDLRQVIVELHVHNGADDLG 473
Query: 230 H 228
H
Sbjct: 474 H 474
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +3
Query: 276 LPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHD 422
LPP+ +L+ S +LEV QHL E+ VR I + GL RG V+D
Sbjct: 42 LPPLHQSLKTYTDSDEYILEVCQHLDEHHVRAITLHRASGLQRGLIVYD 90
>UniRef50_A3L181 Cluster: ATP synthase beta chain; n=3;
Gammaproteobacteria|Rep: ATP synthase beta chain -
Pseudomonas aeruginosa C3719
Length = 154
Score = 42.7 bits (96), Expect = 0.003
Identities = 24/46 (52%), Positives = 28/46 (60%)
Frame = +3
Query: 270 DNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRG 407
D +P I AL+VQ LEV Q LG+ VR+IAM TEGL RG
Sbjct: 21 DAVPSIYEALKVQG--VETTLEVQQQLGDGVVRSIAMGSTEGLKRG 64
>UniRef50_Q93UD9 Cluster: ATP synthase beta subunit; n=12;
Candidatus Carsonella ruddii|Rep: ATP synthase beta
subunit - Carsonella ruddii
Length = 139
Score = 40.7 bits (91), Expect = 0.012
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = +3
Query: 273 NLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVHDS 425
N+P I NAL + +++ + LEV Q +G+N VR IA T GL R V D+
Sbjct: 21 NIPKIYNALFIPDKN--IFLEVQQQIGKNIVRVIAFGDTNGLKRNMIVLDT 69
>UniRef50_A4FZW9 Cluster: ABC transporter related; n=3;
Methanococcus maripaludis|Rep: ABC transporter related -
Methanococcus maripaludis
Length = 380
Score = 33.5 bits (73), Expect = 1.9
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = -1
Query: 383 VHSNGSDRVFTQVLRDLQHESR*AVLYLECIQNGRKVV 270
++S ++ VF V++D+ +E +++YLE IQNG K++
Sbjct: 301 INSEKTENVFECVIKDVVNEGSSSLVYLEVIQNGLKLM 338
>UniRef50_UPI0000F1EC09 Cluster: PREDICTED: similar to polyprotein;
n=2; Danio rerio|Rep: PREDICTED: similar to polyprotein
- Danio rerio
Length = 1638
Score = 32.7 bits (71), Expect = 3.3
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +3
Query: 273 NLPPILNALEVQNRSPRLVLEVAQ---HLGENTVRTIAM--DGTEGLVRGQPV 416
+LPP L+ NRSP+++L+V + H G T+ T A+ DG+E + QPV
Sbjct: 705 SLPPTRIYLDRPNRSPKVMLKVVKVLLHSGRKTMETHAVLDDGSERTLVLQPV 757
>UniRef50_UPI0000F1E41E Cluster: PREDICTED: similar to polyprotein;
n=2; Danio rerio|Rep: PREDICTED: similar to polyprotein
- Danio rerio
Length = 1706
Score = 32.7 bits (71), Expect = 3.3
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Frame = +3
Query: 273 NLPPILNALEVQNRSPRLVLEVAQ---HLGENTVRTIAM--DGTEGLVRGQPV 416
+LPP L+ NRSP+++L+V + H G T+ T A+ DG+E + QPV
Sbjct: 705 SLPPTRIYLDRPNRSPKVMLKVVKVLLHSGRKTMETHAVLDDGSERTLVLQPV 757
>UniRef50_A2ENI3 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 424
Score = 32.7 bits (71), Expect = 3.3
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 30 IRDFSYKLLNIRSKYTTKMFSTVCRA 107
++DF Y+LL + TTK+FS++ RA
Sbjct: 136 VQDFFYRLLEVNPNLTTKLFSSILRA 161
>UniRef50_UPI00006CBEC0 Cluster: hypothetical protein
TTHERM_00304130; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00304130 - Tetrahymena
thermophila SB210
Length = 161
Score = 32.3 bits (70), Expect = 4.3
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 270 DNLPPILNALEVQNRSPRLVLEVAQHLGENT 362
D L + N L+ QNR +VLEVAQ L +NT
Sbjct: 130 DKLKNLPNYLDRQNRFQNIVLEVAQDLNQNT 160
>UniRef50_Q14VU5 Cluster: ORF13; n=1; Ranid herpesvirus 1|Rep: ORF13
- Ranid herpesvirus 1 (Lucke tumor herpesvirus)
Length = 3149
Score = 31.9 bits (69), Expect = 5.7
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = -2
Query: 385 PSIAMVRTVFSPKCCATSSTSRGERFCTSSAFRMGGR 275
P + T F+PK C++SS+SR E T+++ GGR
Sbjct: 820 PPTGRIHTRFTPKSCSSSSSSRAESGRTTTSPVGGGR 856
>UniRef50_Q5PAK8 Cluster: Ankyrin; n=1; Anaplasma marginale str. St.
Maries|Rep: Ankyrin - Anaplasma marginale (strain St.
Maries)
Length = 1387
Score = 31.9 bits (69), Expect = 5.7
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 188 TFVHKSSRNYW*FFRSIVSYRLRGQTASSADGRKHFRCIFRS 63
TF+H+++RN F S V ++ Q A+S D KH++ + S
Sbjct: 227 TFLHRAARNQGDEFTSHVLEHVKAQVAASKDIAKHYKALLCS 268
>UniRef50_A0BUK6 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 449
Score = 31.9 bits (69), Expect = 5.7
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = -1
Query: 383 VHSNGSDRVFTQVLRDLQHESR*AVLYLECIQNGRKVVFELYVNHSTDNCNHL 225
+H N +D++ + +L+ LQ + V+Y + R ++FE Y + C L
Sbjct: 43 IHDNTNDQIVSDILQQLQRLLKIEVMYFRQAEPIRMILFEKYKENGKQCCQLL 95
>UniRef50_A1GDC5 Cluster: Putative uncharacterized protein; n=1;
Salinispora arenicola CNS205|Rep: Putative
uncharacterized protein - Salinispora arenicola CNS205
Length = 525
Score = 31.1 bits (67), Expect = 9.9
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Frame = -1
Query: 407 SAH*PLGTVHSNGSDRVFTQVLRDLQHESR*A-------VLYLECIQNGRKVVFELYVNH 249
+A+ +G +H +G+D++ TQVL DLQ + A V +E +++G V EL V+
Sbjct: 376 AANQAVGRLHGDGADQIVTQVLGDLQGQRLLAAGQGHVNVQGVEQVRHG--VARELGVDD 433
Query: 248 STDNCNHLTLG 216
D+ +H T G
Sbjct: 434 RADDPDHATGG 444
>UniRef50_Q9LCZ9 Cluster: Photoassimilate-responsive protein
PAR-1b-like protein; n=3; core eudicotyledons|Rep:
Photoassimilate-responsive protein PAR-1b-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 183
Score = 31.1 bits (67), Expect = 9.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 270 DNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 401
+NLP + + + R +LE A GE T RT A+D EG+V
Sbjct: 29 ENLPTNMCSFSISASGKRCILETANVAGEFTCRTSAVD-VEGIV 71
>UniRef50_Q29G81 Cluster: GA13753-PA; n=1; Drosophila
pseudoobscura|Rep: GA13753-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 560
Score = 31.1 bits (67), Expect = 9.9
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 262 SSKTTFLPF*MHSRYRTAHRDSCWRSRSTWVKTRSEPLL 378
S+ T F P SRYRT R + RS +T T +EP L
Sbjct: 420 STSTHFSPLRNLSRYRTTPRITAGRSTTTTTSTTAEPAL 458
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,912,230
Number of Sequences: 1657284
Number of extensions: 8133597
Number of successful extensions: 18026
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 17704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18024
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20232460752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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