Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M12
         (425 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.35 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   1.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.3  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   4.4  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   4.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   5.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   5.8  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.6  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.0 bits (52), Expect = 0.35
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -2

Query: 151 FSEVLLATAFVARRPALQTVENIFVV 74
           F  VL+  A V  R ALQTV N F+V
Sbjct: 202 FGNVLVILAVVRER-ALQTVTNYFIV 226


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 226 RWLQLSVLWLTYS 264
           +WLQ+  LWL +S
Sbjct: 653 KWLQVLALWLNHS 665


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 312 RSPRLVLEVAQHLGENTVRTIAMDGTE 392
           RSP  + ++AQ+ G N +   A+D T+
Sbjct: 897 RSPDTLRKIAQNRGTNPLAPDAVDLTQ 923


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 51  LLNIRSKYTTKMFSTVC 101
           LL +  +YTT+ F T C
Sbjct: 190 LLKVWGRYTTEGFLTTC 206


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 51  LLNIRSKYTTKMFSTVC 101
           LL +  +YTT+ F T C
Sbjct: 190 LLKVWGRYTTEGFLTTC 206


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 98   LQSWPSGHEGGS 133
            L  W SGH GG+
Sbjct: 1421 LLHWKSGHNGGA 1432


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 98   LQSWPSGHEGGS 133
            L  W SGH GG+
Sbjct: 1417 LLHWKSGHNGGA 1428


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 242 DNCNHLTLGF 213
           DNCNHL   F
Sbjct: 182 DNCNHLMTKF 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,587
Number of Sequences: 438
Number of extensions: 2914
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)