Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M11
(498 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 234 9e-61
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 193 2e-48
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 156 2e-37
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 129 4e-29
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 127 2e-28
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 120 2e-26
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 117 2e-25
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 106 2e-22
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 105 4e-22
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 102 4e-21
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 102 5e-21
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 101 7e-21
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 92 5e-18
UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_030012... 71 1e-11
UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;... 63 3e-09
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 55 8e-07
UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n... 43 0.003
UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein ... 42 0.006
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 38 0.095
UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit... 38 0.17
UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7; n... 37 0.22
UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albic... 37 0.29
UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.38
UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.38
UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyc... 36 0.67
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.67
UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n... 35 1.2
UniRef50_Q3EB00 Cluster: Uncharacterized protein At3g26180.2; n=... 33 3.6
UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_UPI0000D575D2 Cluster: PREDICTED: similar to CG13868-PA... 33 4.7
UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7; n... 33 4.7
UniRef50_Q9ZCK0 Cluster: Dephospho-CoA kinase; n=10; Rickettsia|... 33 4.7
UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211; Bacter... 32 6.2
UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7; n... 32 6.2
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 32 8.2
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 234 bits (572), Expect = 9e-61
Identities = 109/125 (87%), Positives = 117/125 (93%)
Frame = +1
Query: 124 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 303
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 304 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 483
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 484 GRAGT 498
GRAGT
Sbjct: 129 GRAGT 133
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 193 bits (471), Expect = 2e-48
Identities = 90/118 (76%), Positives = 104/118 (88%), Gaps = 1/118 (0%)
Frame = +1
Query: 145 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 321
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 322 SLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 495
SLMMHGRNNGKKLMAVRI+KHA EIIHLLT +NP+QV+V A++NSGPRED+TRIG AG
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAG 125
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 156 bits (379), Expect = 2e-37
Identities = 79/117 (67%), Positives = 93/117 (79%)
Frame = +1
Query: 148 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 327
IKLF ++ V+V D+SL DYI++ + LPH+AGR+ KRFRKA+C IVERLTNSL
Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQTKRFRKARCFIVERLTNSL 75
Query: 328 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGT 498
MM+GRNNGKKL+A RIVKHAFEII LLT +NPLQVLV A+ GPREDSTRIG AGT
Sbjct: 76 MMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGT 132
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 129 bits (311), Expect = 4e-29
Identities = 55/117 (47%), Positives = 81/117 (69%)
Frame = +1
Query: 145 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 324
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 325 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 495
LM+ RN+GKK+ + IVKHAF ++H TG+NP+Q+LV AI N P EDS + +G
Sbjct: 79 LMLKSRNSGKKIKTIAIVKHAFYLLHKTTGKNPIQLLVDAISNCAPHEDSLMLSNSG 135
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 127 bits (306), Expect = 2e-28
Identities = 62/113 (54%), Positives = 81/113 (71%)
Frame = +1
Query: 145 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 324
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 325 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 483
+M +N GKK +A IVK AF+IIH TGENP+QVLV A+ N+ PRE++T I
Sbjct: 69 VMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTI 121
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 120 bits (289), Expect = 2e-26
Identities = 63/116 (54%), Positives = 77/116 (66%)
Frame = +1
Query: 148 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 327
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 328 MMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 495
M GRN GKK A IVK AF++I+ TG+NPLQV + AIIN+ PRE+ TRI G
Sbjct: 96 MRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGG 151
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 117 bits (281), Expect = 2e-25
Identities = 60/123 (48%), Positives = 84/123 (68%)
Frame = +1
Query: 130 PADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVE 309
P + EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI E
Sbjct: 17 PLGMAEINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAE 74
Query: 310 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGR 489
R SLM HGRN+GKK +A+ I + A IIH +T +NPLQVLV AI+NSGPRED+ RIGR
Sbjct: 75 RFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGR 134
Query: 490 AGT 498
AG+
Sbjct: 135 AGS 137
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 106 bits (255), Expect = 2e-22
Identities = 51/115 (44%), Positives = 76/115 (66%)
Frame = +1
Query: 151 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 330
KLFG+W ++ D S + Y++V + H+ GR+A K+F+K++ IVERL N LM
Sbjct: 29 KLFGKWDVAEIHYEDPSTRRYLAVTP-----VAHTMGRHAQKQFKKSEISIVERLANRLM 83
Query: 331 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 495
G N GKK A++IV+ AF+I+H T ENP+QVLV+A+ N+ PRE++ R+ G
Sbjct: 84 KTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGG 138
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 105 bits (253), Expect = 4e-22
Identities = 49/115 (42%), Positives = 78/115 (67%)
Frame = +1
Query: 151 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 330
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 331 MHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 495
N GKK + +R V+ AF+I++ T +NP+QVLV AI N+GPRE+ R+ G
Sbjct: 63 RTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGG 117
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 102 bits (245), Expect = 4e-21
Identities = 63/139 (45%), Positives = 83/139 (59%), Gaps = 17/139 (12%)
Frame = +1
Query: 118 PLPQPADIP-EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQ 294
PL + IP EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA
Sbjct: 7 PLQERFFIPHEIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKAN 63
Query: 295 CPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAFEIIHLLTGENPL 426
IVERL N +M G + N KK+ A +VK AF+II TG+NP+
Sbjct: 64 VHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPI 123
Query: 427 QVLVTAIINSGPREDSTRI 483
QVLV AI N+ PRED+T +
Sbjct: 124 QVLVWAIENAAPREDTTSV 142
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 102 bits (244), Expect = 5e-21
Identities = 53/126 (42%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +1
Query: 124 PQPADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQC 297
P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F KA
Sbjct: 10 PEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEFNKANM 66
Query: 298 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDST 477
IVERL N LM N GKK +A+ IV+ AFE+I+ T NP++VLV AI N+GPRE++
Sbjct: 67 MIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPREETV 126
Query: 478 RIGRAG 495
R+ G
Sbjct: 127 RLKYGG 132
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 101 bits (243), Expect = 7e-21
Identities = 54/117 (46%), Positives = 72/117 (61%)
Frame = +1
Query: 145 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 324
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 325 LMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 495
LM N GKK + I++ A I+ T ENP+QV+V A+ NSGPRE++TRI G
Sbjct: 65 LMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGG 121
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 92.3 bits (219), Expect = 5e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 289 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 444
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>UniRef50_UPI00003C8539 Cluster: hypothetical protein Faci_03001272;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001272 - Ferroplasma acidarmanus fer1
Length = 182
Score = 70.9 bits (166), Expect = 1e-11
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 181 VQVSDMSLQDYISVKEKYAKYLP-HSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKK 357
+Q+ D L YI++ YL + GR+++ K +ERL N+LM + GKK
Sbjct: 9 IQIKDQGLATYINL----TSYLNLDTGGRFSNYLSGKRNVNTIERLLNNLMRTEKWTGKK 64
Query: 358 LMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 495
A +++ AF+II T +NP+Q+LV+AI NS PRE+ TR+ G
Sbjct: 65 YSAYKVMSQAFDIIATKTKQNPVQILVSAIENSAPREEVTRLKYGG 110
>UniRef50_UPI0000F2E821 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 280
Score = 63.3 bits (147), Expect = 3e-09
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +1
Query: 391 EIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGT 498
++ HLL +NPLQVLV AIINSGPREDSTRIGRAGT
Sbjct: 174 QLQHLLLAQNPLQVLVNAIINSGPREDSTRIGRAGT 209
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 55.2 bits (127), Expect = 8e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 55 MAEENWTEEVADAGGMVVDNMPLPQPADIPEIKLFGRWSCYDVQVSDMSLQDYIS 219
M+E + + V + P+ QPA++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_P49495 Cluster: Chloroplast 30S ribosomal protein S7; n=1;
Odontella sinensis|Rep: Chloroplast 30S ribosomal
protein S7 - Odontella sinensis (Marine centric diatom)
Length = 158
Score = 43.2 bits (97), Expect = 0.003
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +1
Query: 274 KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIIN 453
KRF +A L + L+ +GKK +A IV AFEII + T E+PL V AI N
Sbjct: 9 KRFPEADSTYNSYLVSLLITRILKSGKKNLAQNIVNAAFEIIKVKTNEDPLVVFERAIRN 68
Query: 454 SGP 462
+ P
Sbjct: 69 ASP 71
>UniRef50_Q5AK02 Cluster: Likely mitochondrial ribosomal protein S7;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein S7 - Candida albicans (Yeast)
Length = 251
Score = 42.3 bits (95), Expect = 0.006
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +1
Query: 262 RYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVT 441
+YA+K+ P V+ LTN +M H GKK A ++V A I+ L ++P++VL
Sbjct: 105 KYANKKIPLRSDPTVDNLTNLIMRH----GKKAKAQKVVSRALYIVQLKLRKDPIEVLRE 160
Query: 442 AIINSGP 462
+ GP
Sbjct: 161 TLDKLGP 167
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 38.3 bits (85), Expect = 0.095
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = -2
Query: 395 ISKACLTIRTAISFLPLLRPCIIKELVKRSTIGH*ALRNRL*AYLPAECGKYFAY 231
+SKA LT+ A FLP+ P I + ST+G L RL + LP CG+Y +
Sbjct: 1 MSKAFLTMWYARCFLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_O13744 Cluster: Mitochondrial ribosomal protein subunit
S7; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S7 - Schizosaccharomyces pombe
(Fission yeast)
Length = 259
Score = 37.5 bits (83), Expect = 0.17
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +1
Query: 304 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 462
V+ L N +M +GKK A +IV A II TGENP+ VL AI P
Sbjct: 126 VQHLVNLIM----RDGKKAKAEKIVATALSIIQKETGENPIDVLKQAIAEISP 174
>UniRef50_P19458 Cluster: Chloroplast 30S ribosomal protein S7;
n=22; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Guillardia theta (Cryptomonas phi)
Length = 156
Score = 37.1 bits (82), Expect = 0.22
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +1
Query: 310 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 447
RL N L + GKK +A RI+ +AF+II TGE+ + V +AI
Sbjct: 21 RLVNMLTVRILKEGKKHLAQRIIYNAFDIIKQRTGEDAILVFESAI 66
>UniRef50_Q6BRT2 Cluster: Similar to CA4785|IPF3361 Candida albicans
IPF3361; n=2; Saccharomycetaceae|Rep: Similar to
CA4785|IPF3361 Candida albicans IPF3361 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 263
Score = 36.7 bits (81), Expect = 0.29
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +1
Query: 265 YAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 444
+A+KR P ++ TN +M +GKK A +I+ A I++L T ++PL +L
Sbjct: 118 FANKRIPLPSNPTIDNFTNLIM----RDGKKSKAQKILSRALYIVYLKTRKDPLVILEET 173
Query: 445 IINSGPREDSTRIGRAG 495
+ P +T++ + G
Sbjct: 174 LDKMAPLM-ATKVQKTG 189
>UniRef50_Q2J9E2 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 374
Score = 36.3 bits (80), Expect = 0.38
Identities = 29/99 (29%), Positives = 42/99 (42%)
Frame = +1
Query: 199 SLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIV 378
+LQ + + K A P +A R R + TN L G +G +A+
Sbjct: 93 NLQQELEYRNKVAPVAPAAADRTLRMRVSLHVGSTTDSGTNRL---GDGSGAARIALHRQ 149
Query: 379 KHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAG 495
A + HLL NP LV AI++S ED+ G +G
Sbjct: 150 LDAAAVRHLLEESNPRTTLVAAILSSRAYEDAVLSGYSG 188
>UniRef50_Q4P8U6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 299
Score = 36.3 bits (80), Expect = 0.38
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 298 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 462
P +E LTN LM +GKK A R + II +T NPL ++ AI + P
Sbjct: 164 PTLEFLTNLLM----KDGKKAQAQRFITRTLSIISSVTNSNPLPLIHDAIYKAAP 214
>UniRef50_Q6FWL2 Cluster: Similarities with sp|P47150 Saccharomyces
cerevisiae YJR113c RSM7; n=2; Saccharomycetales|Rep:
Similarities with sp|P47150 Saccharomyces cerevisiae
YJR113c RSM7 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 274
Score = 35.5 bits (78), Expect = 0.67
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 298 PIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 462
P V+ +TN +M H GKK A +I+ A +H T ++P+++L A+ + P
Sbjct: 139 PTVQHVTNMIMRH----GKKDRAQKIISRALYFLHCKTRKDPVELLKKALDDMAP 189
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.5 bits (78), Expect = 0.67
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +1
Query: 55 MAEENWTEEVADAGG-MVVDNMPLPQPADIPEIKLF--GRWSCYDVQVSDMSLQDYISVK 225
+AEENW + +ADAGG M M + +D+ E+ L+ GR + ++++ D + Y S +
Sbjct: 208 VAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH--KQYPSSE 265
Query: 226 EKYAKYLPHSAG 261
K+ + P G
Sbjct: 266 FKFKTFTPPKTG 277
>UniRef50_Q06SG5 Cluster: Chloroplast 30S ribosomal protein S7; n=3;
Chlorophyceae|Rep: Chloroplast 30S ribosomal protein S7
- Stigeoclonium helveticum (Green alga)
Length = 174
Score = 34.7 bits (76), Expect = 1.2
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 298 PIVERLTNSLMMHG-RNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDS 474
PI +++ ++++ NGKK +A RIV F I +NP++V A+ N PR +
Sbjct: 16 PIYNKVSVHMLVNRILKNGKKSIAYRIVYSVFRKISETMNQNPVEVWEKALNNVKPRVEV 75
Query: 475 TRIGRAGT 498
RAG+
Sbjct: 76 KPRRRAGS 83
>UniRef50_Q3EB00 Cluster: Uncharacterized protein At3g26180.2; n=1;
Arabidopsis thaliana|Rep: Uncharacterized protein
At3g26180.2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 368
Score = 33.1 bits (72), Expect = 3.6
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 240 FCILLFYRNIILQRHVRYLNVITTPSPKKFD-FGNISRLW*WHVVHNHAARVGDFFGPVL 64
FC++ I + +++L PSP KF GN+ ++ + H + + +GPV+
Sbjct: 8 FCLITLASLIFFAKKIKHLKWNLPPSPPKFPVIGNLHQI--GELPHRSLQHLAERYGPVM 65
Query: 63 LSH 55
L H
Sbjct: 66 LLH 68
>UniRef50_A7TS76 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 589
Score = 33.1 bits (72), Expect = 3.6
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 307 ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENP--LQVLVTAIINSGPREDSTR 480
ER ++ L+ + +K + V++ KH FEI+H + G P + VL T +++S R+ +
Sbjct: 477 ERNSSKLLSQRQKQYQKFLHVKM-KHVFEILHSIEGNKPYTMTVLSTLVVDS-LRDGNNP 534
Query: 481 IG 486
IG
Sbjct: 535 IG 536
>UniRef50_UPI0000D575D2 Cluster: PREDICTED: similar to CG13868-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG13868-PA - Tribolium castaneum
Length = 438
Score = 32.7 bits (71), Expect = 4.7
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 144 RNQTFWAMELL*RSSIGHVFAGLYFGKREVCKIFTTF 254
RN + LL R GH+ AG+YF +E C FT F
Sbjct: 324 RNLVYNFRSLLARDQKGHLIAGVYFKVKENCDEFTIF 360
>UniRef50_P12339 Cluster: Chloroplast 30S ribosomal protein S7;
n=94; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S7 - Zea mays (Maize)
Length = 156
Score = 32.7 bits (71), Expect = 4.7
Identities = 22/60 (36%), Positives = 30/60 (50%)
Frame = +1
Query: 268 AHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 447
A KR K+ RL N ++ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 7 AEKRTAKSDPIFRNRLVNMVVNRIMKDGKKSLAYQILYRAVKKIQQKTETNPLLVLRQAI 66
>UniRef50_Q9ZCK0 Cluster: Dephospho-CoA kinase; n=10;
Rickettsia|Rep: Dephospho-CoA kinase - Rickettsia
prowazekii
Length = 191
Score = 32.7 bits (71), Expect = 4.7
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = -1
Query: 237 CILLFYRNIILQRHVRYLNVITTPSPKKFDFGNISRLW*WHVVHNHAAR--VGDFFGPVL 64
CI Y++I+LQ + L ++ P + F+ IS L + +N AR + +F P+L
Sbjct: 34 CIKELYKDIVLQTQI--LKIL--PELEYFNIRKISNL----IYNNDIAREKLQNFIYPLL 85
Query: 63 LSHISHFYSQFTNYNLALS 7
+ + F + TNY LA S
Sbjct: 86 IDKLILFKKENTNYKLAFS 104
>UniRef50_Q97SQ4 Cluster: 30S ribosomal protein S7; n=211;
Bacteria|Rep: 30S ribosomal protein S7 - Streptococcus
pneumoniae
Length = 156
Score = 32.3 bits (70), Expect = 6.2
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = +1
Query: 301 IVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGP 462
+V RL N +M+ +GK+ A IV AFE I TG + L+V TA+ N P
Sbjct: 22 LVTRLINRVML----DGKRGTAASIVYGAFEQIKEATGNDALEVFETAMENIMP 71
>UniRef50_P61841 Cluster: Chloroplast 30S ribosomal protein S7;
n=191; Magnoliophyta|Rep: Chloroplast 30S ribosomal
protein S7 - Arabidopsis thaliana (Mouse-ear cress)
Length = 155
Score = 32.3 bits (70), Expect = 6.2
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 310 RLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAI 447
RL N L+ +GKK +A +I+ A + I T NPL VL AI
Sbjct: 21 RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAI 66
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 31.9 bits (69), Expect = 8.2
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +1
Query: 19 VIIRKLRIKV*NMAEENWTEEVADAGGMVVDNMPLPQPADIPEIKLFGRWSCYDVQVSDM 198
V +++ KV + NW +A ++ +N L PE+++ W +D ++ D
Sbjct: 77 VHLKRAPFKVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDE 129
Query: 199 SLQDYISVKEKYAKYLPH 252
+L D I+ + + KYLP+
Sbjct: 130 NLTDIINTRHQNVKYLPN 147
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,612,821
Number of Sequences: 1657284
Number of extensions: 10526468
Number of successful extensions: 25863
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 25244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25849
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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