Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M11
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   4.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   4.7  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.1  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 104 LWTTCHYHSRLIFPKSNFLGDGVVMTFKYRTCLCRIIFR 220
           ++TT  Y S +I+  +N +  G+ + +     +C I  R
Sbjct: 337 VYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICAITKR 375


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = +2

Query: 104 LWTTCHYHSRLIFPKSNFLGDGVVMTFKYRTCLCRIIFR 220
           ++TT  Y S +I+  +N +  G+ + +     +C I  R
Sbjct: 62  VYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICAITKR 100


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 243 IFCILLFYRNIILQRHVR 190
           +FC   F R+  LQRH+R
Sbjct: 350 LFCGKRFTRSDELQRHLR 367


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 471 VFSWTRINNSSHQNLQRV-FTRQQVNNFKGMFNDT 370
           V+S+    N   Q  +R  FTR Q++  +G+F  T
Sbjct: 115 VYSYFAGVNPRKQRRERTTFTRAQLDLLEGLFAKT 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,846
Number of Sequences: 336
Number of extensions: 2785
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)