Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M10
         (496 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   4.3  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   5.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   5.7  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    22   10.0 
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    22   10.0 

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 9/41 (21%), Positives = 14/41 (34%)
 Frame = +3

Query: 369 FIYYQPKVKNLKTKATMKGYHXXXXXXXXXXXXXNHHTIGT 491
           F+ + P+V  + T  T                  +H T GT
Sbjct: 457 FVIFDPQVDEVSTYCTYSSDSTTTTTTTKSASTSSHSTTGT 497


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 383 AKSEKLENESDDEGLSFKEKKAKRLKAQAK 472
           + S+   + S++E  +FK   A++ K QAK
Sbjct: 382 SSSDSSSSSSEEEAENFKISPAEQYKKQAK 411


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 383 AKSEKLENESDDEGLSFKEKKAKRLKAQAK 472
           + S+   + S++E  +FK   A++ K QAK
Sbjct: 382 SSSDSSSSSSEEEAENFKISTAEQYKKQAK 411


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 345 VLLSAVGCFIYYQPKV 392
           ++L   GC +YY PK+
Sbjct: 374 LILENCGCVLYYLPKL 389


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 345 VLLSAVGCFIYYQPKV 392
           ++L   GC +YY PK+
Sbjct: 374 LILENCGCVLYYLPKL 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,241
Number of Sequences: 2352
Number of extensions: 7422
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43977336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)