Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M10
         (496 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   3.1  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   5.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.4  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 185 RKPNF*QICYRFLQYFLRY 129
           R P F  +  + L YFLRY
Sbjct: 416 RDPAFYMLYQKILSYFLRY 434


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 194 EQELTNLFEKYGPL 235
           EQE    FEKYG L
Sbjct: 182 EQEAKRRFEKYGQL 195



 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 142 YWRKR*HICQKFGLR 186
           YW     +C K+GLR
Sbjct: 46  YWNVPTFMCHKYGLR 60


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 185 RKPNF*QICYRFLQYFLRY 129
           R P F  +    L YFLRY
Sbjct: 416 RDPAFYMLYQNILSYFLRY 434


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,098
Number of Sequences: 438
Number of extensions: 1711
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)