Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M09
(558 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F12.02c |p23fy||translationally controlled tumor protein ho... 139 3e-34
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.46
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 28 0.81
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 28 0.81
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 28 0.81
SPAC30D11.07 |nth1||DNA endonuclease III|Schizosaccharomyces pom... 28 0.81
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 1.1
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 27 1.4
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 27 2.5
SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 3.3
SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 25 5.7
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 5.7
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 7.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 25 7.5
SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase |Schi... 25 7.5
SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces po... 25 7.5
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar... 25 7.5
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 25 10.0
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 25 10.0
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 25 10.0
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 10.0
>SPAC1F12.02c |p23fy||translationally controlled tumor protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 139 bits (336), Expect = 3e-34
Identities = 74/163 (45%), Positives = 107/163 (65%), Gaps = 1/163 (0%)
Frame = +3
Query: 72 MIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTV-IRTQDDIHIDGFNPSAEEADEGTD 248
M++YKDVI+GDE+ SD Y +K +D+++YE + V ++ D+ I G NPSAE+A+E +
Sbjct: 1 MLLYKDVISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDI-GANPSAEDAEENAE 59
Query: 249 SNVETGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKV 428
ET ++V + RL T +F DKKSY Y+K YMK + A+L+E P++V +F+ N
Sbjct: 60 EGTETVNNLVYSFRLSPT-SF-DKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGF 117
Query: 429 MKDILARFKDLQFFTGESMDCDGMVAMMEYRNIHGTDVPFMMF 557
+K ILA FKD F+ GESMD D MV +M YR T P+M+F
Sbjct: 118 VKKILANFKDYDFYIGESMDPDAMVVLMNYREDGIT--PYMIF 158
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.46
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = -3
Query: 310 NAYVSTSL*FRTM---STPVSTLESVPSSA---SSAEGLNPSMWISSCVLITVLPVTS*I 149
N STS+ + + STP++T S++ +S + + ISS +T PVT+
Sbjct: 531 NCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTN 590
Query: 148 TSSINLTLYVSENISSPVITS 86
++ LY S I+SP TS
Sbjct: 591 CTTSTSVLYTSTPITSPNSTS 611
Score = 25.8 bits (54), Expect = 4.3
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 271 STPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSSINLTLYVSENISSPVI 92
+TPV+ +VP ++SS + S+ V T PVTS ++ N T S +S +
Sbjct: 406 TTPVTP--TVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPV 463
Query: 91 TS 86
TS
Sbjct: 464 TS 465
Score = 24.6 bits (51), Expect = 10.0
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -3
Query: 277 TMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS-*ITSSINLTLYVSENISS 101
++STP++ S++S++ + P+ S+ + LP TS T+S ++ S ++S+
Sbjct: 186 SLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLST 245
Query: 100 PV 95
P+
Sbjct: 246 PI 247
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 28.3 bits (60), Expect = 0.81
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +3
Query: 141 DEVIYEVTGKTVIRTQDDIHIDGFNPSAEE-----ADEGTDSNVET-GVDIVLNHRLVE 299
DE+ + + +D + + F EE A E ++ +T +D+VL+HRL+E
Sbjct: 145 DEIRFSSRNSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPEDTRAIDVVLDHRLIE 203
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 28.3 bits (60), Expect = 0.81
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 24 SRSFGFIILNRLQSIKMIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIR 182
SR+ + I +L +++YK + M DT++ ++ +YE++G +R
Sbjct: 118 SRNLLYSIAEKLGLSSIVVYKAELITSSMLLDTFQTMESNQEMYELSGTRKMR 170
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 28.3 bits (60), Expect = 0.81
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 129 VKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYA 308
+KLID I + G D HI N A EA +++ +GV +V R + ++
Sbjct: 455 LKLIDFGIAKAIGNDTTNIHRDSHIGTINYMAPEALTDMNAHTNSGVKLVKLGRPSDVWS 514
Query: 309 FG 314
G
Sbjct: 515 LG 516
>SPAC30D11.07 |nth1||DNA endonuclease III|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 355
Score = 28.3 bits (60), Expect = 0.81
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 267 VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKT 413
+D V ++L+E F ++K T+YLK + L K + PD V+ T
Sbjct: 89 IDEVSLNKLIEKVGFHNRK--TIYLKQMARILSEKFQGDIPDTVEDLMT 135
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.9 bits (59), Expect = 1.1
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = -3
Query: 301 VSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSSINLTLY 122
+S+SL + STP T PS+ S L PS S+ +++ V S +TS I+ T
Sbjct: 566 ISSSLTATSTSTPALTHSITPSNTSYTSSLIPSS--STDYSSSLITVCSNVTSEISSTSL 623
Query: 121 VS 116
S
Sbjct: 624 AS 625
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 27.5 bits (58), Expect = 1.4
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 191 VLCSDHGLAGDFINNFVDQLNFIRIREHLVTSYNILIDYHFDGLE 57
V+C D GL+G+F + IR + + Y LI Y FDG E
Sbjct: 288 VMCLDLGLSGEFCTAVA---HSIREQCQMYIKYLSLIGYLFDGSE 329
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 171 TVIRTQDDIHIDGFNPSAEEADEGTDSNVE 260
T+ ++DDIH D ++ A+ DE SNVE
Sbjct: 50 TIDDSEDDIHYDDYD--ADAVDEEMPSNVE 77
>SPBC1271.08c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 140
Score = 26.2 bits (55), Expect = 3.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 45 ILNRLQSIKMIIYKDVITGDEMFSDTYKVKLID 143
ILN++ M IY IT D SDTY++ D
Sbjct: 30 ILNKIFHPCMYIYSRGITNDTYSSDTYELDWYD 62
>SPAPB2C8.01 |||glycoprotein |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.4 bits (53), Expect = 5.7
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -3
Query: 301 VSTSL*FRTMSTPVSTLESVPSS-ASSAEGLNPSMW 197
V+T++ + + STPVST+ +P++ S GL +++
Sbjct: 981 VATTITYSSSSTPVSTVVVIPTAVCSGVRGLQYAVY 1016
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 5.7
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -3
Query: 322 FLSPNAYVSTSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITS 143
F S ++ L + STP+S P+S ++ G N + + + + T L +S S
Sbjct: 682 FTSSGFNTTSGLPTSSASTPLSNSTVAPTSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPS 741
Query: 142 SINLTL-YVSENISSPVI 92
S + T +S ++S +I
Sbjct: 742 SGSSTFSRLSSTLTSSII 759
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 141 DEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTD 248
DEV + +G I + +D + EE+DE D
Sbjct: 103 DEVFFSASGDATIHLSGNFLVDEEDEEEEESDEDYD 138
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.0 bits (52), Expect = 7.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 554 HHEWYIGTMDISVLHHGDHAI 492
H +W+ G + S L+ GDH I
Sbjct: 1826 HEQWHEGLEEASRLYFGDHNI 1846
>SPAC4D7.02c |||glycerophosphoryl diester phosphodiesterase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.0 bits (52), Expect = 7.5
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 528 GYFCTPSWRPCHHSPWIHL 472
G T SW H+S W+H+
Sbjct: 282 GPIVTKSWHYFHYSEWLHM 300
>SPAP27G11.10c |nup184||nucleoporin Nup184|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1564
Score = 25.0 bits (52), Expect = 7.5
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Frame = +3
Query: 144 EVIYE--VTGKTVIRTQDDIHIDG---FNPSAEEA-DEGTDSNV 257
E+I E VTG +I Q+ +H+D F P+AE + +GT +
Sbjct: 501 EIIPEPNVTGNALIELQESLHLDSYGFFFPNAERSLPKGTRGRI 544
>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 7.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3
Query: 268 TPVSTLESVPSSASSAEG 215
+P+S+LES+PS +S+ G
Sbjct: 151 SPISSLESLPSRSSTGSG 168
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 24.6 bits (51), Expect = 10.0
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +3
Query: 78 IYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEADEGTDSNV 257
I K G E ++ ++++ +DE + +T++ DD+ + + E D V
Sbjct: 21 ILKKHPAGTENITNIWQMRAMDEECRKQLAETILPLPDDVSVTDILIPTRDGTE-IDGRV 79
Query: 258 ETGVDIVLNHR 290
T V + ++R
Sbjct: 80 FTPVSVPADYR 90
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 24.6 bits (51), Expect = 10.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 9 VLGARSRSFGFIILNRLQS 65
+ G + SF F++LNRLQ+
Sbjct: 15 IAGVATFSFAFLVLNRLQA 33
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 24.6 bits (51), Expect = 10.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +3
Query: 204 DGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAFGD 317
D F PS E +E TD+ ++ V ++ V F D
Sbjct: 16 DIFFPSGSEVEESTDAPIQRTVQPIVTGSSVLALKFAD 53
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 24.6 bits (51), Expect = 10.0
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 246 DSNVETGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEE 380
+ ++E V ++LN L + Y F K++ L Y+ + V+ LE+
Sbjct: 1680 EPDLENNVKLILNLILSKDYGFLLKENLAGILLTYLNQNVSSLEK 1724
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,443,509
Number of Sequences: 5004
Number of extensions: 50968
Number of successful extensions: 173
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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