Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M08
         (495 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GU68 Cluster: Eukaryotic translation initiation facto...    75   9e-13
UniRef50_Q8MX76 Cluster: Eukaryotic translation initiation facto...    37   0.28 
UniRef50_Q5K6T6 Cluster: Putative uncharacterized protein; n=2; ...    34   1.5  
UniRef50_P63241 Cluster: Eukaryotic translation initiation facto...    34   1.5  
UniRef50_Q2TWV6 Cluster: Translation initiation factor 5A; n=1; ...    33   3.5  
UniRef50_Q4S750 Cluster: Chromosome 14 SCAF14723, whole genome s...    32   6.1  
UniRef50_Q4QA21 Cluster: Eukaryotic initiation factor 5a, putati...    32   6.1  
UniRef50_A5DN71 Cluster: Putative uncharacterized protein; n=1; ...    32   8.1  
UniRef50_P80639 Cluster: Eukaryotic translation initiation facto...    32   8.1  

>UniRef50_Q9GU68 Cluster: Eukaryotic translation initiation factor
           5A; n=4; Coelomata|Rep: Eukaryotic translation
           initiation factor 5A - Drosophila melanogaster (Fruit
           fly)
          Length = 159

 Score = 74.9 bits (176), Expect = 9e-13
 Identities = 33/39 (84%), Positives = 36/39 (92%)
 Frame = +3

Query: 9   LGVQLRTDFDSGKELLCTVLKSCGEECVIAVKANTALDK 125
           LG QLR DFDSGK+LLCTVLK+CGEECVIA+K NTALDK
Sbjct: 121 LGEQLRLDFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159


>UniRef50_Q8MX76 Cluster: Eukaryotic translation initiation factor
           5A; n=13; Alveolata|Rep: Eukaryotic translation
           initiation factor 5A - Plasmodium falciparum
          Length = 161

 Score = 36.7 bits (81), Expect = 0.28
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = +3

Query: 18  QLRTDFDSGKELLCTVLKSCGEECVIAVK 104
           Q+R  FD+GK +L +VL +CG+E +IA K
Sbjct: 129 QIRNLFDNGKSVLVSVLSACGQEKIIAAK 157


>UniRef50_Q5K6T6 Cluster: Putative uncharacterized protein; n=2;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 552

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +1

Query: 232 NFKKKYSGGVRTSRAYSPLCLSPEVQISGNVTRYH*NFANRFHRSPFIPATVLMHSIILD 411
           NF  +   G+R++ + SPLCLS     +G+      +    FH SP + +  L H + +D
Sbjct: 67  NFSYQAPTGIRSNTSISPLCLSKNPSSNGSARETEADTDTSFHPSP-VDSHALRHPLEID 125


>UniRef50_P63241 Cluster: Eukaryotic translation initiation factor
           5A-1; n=75; Eukaryota|Rep: Eukaryotic translation
           initiation factor 5A-1 - Homo sapiens (Human)
          Length = 154

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 9   LGVQLRTDFDSGKELLCTVLKSCGEECVIAVKA 107
           LG ++   +D G+E+L TVL +  EE  +A+KA
Sbjct: 119 LGKEIEQKYDCGEEILITVLSAMTEEAAVAIKA 151


>UniRef50_Q2TWV6 Cluster: Translation initiation factor 5A; n=1;
           Aspergillus oryzae|Rep: Translation initiation factor 5A
           - Aspergillus oryzae
          Length = 154

 Score = 33.1 bits (72), Expect = 3.5
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +3

Query: 9   LGVQLRTDFDSGKELLCTVLKSCGEECVIAVK 104
           LG Q+  DF++G +LL  V+ + GEE  ++V+
Sbjct: 117 LGQQIEQDFEAGTDLLIAVISAMGEEHAVSVR 148


>UniRef50_Q4S750 Cluster: Chromosome 14 SCAF14723, whole genome
            shotgun sequence; n=3; Tetraodon nigroviridis|Rep:
            Chromosome 14 SCAF14723, whole genome shotgun sequence -
            Tetraodon nigroviridis (Green puffer)
          Length = 3383

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 16/69 (23%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +2

Query: 182  SKKKPYYINVKHNMSNLTLKKNIVVGCGRHGLTLHSVC-HLKSK*VETLHGTIETLPIGF 358
            SK+ P ++N   + +++ +K+  V  C R       +C  ++++ V  + GT+++ P   
Sbjct: 1435 SKRLPTFVNTPQDHAHIEVKRRRVGLCPRDNKMRFLICLFVRTRQVTRIDGTVDSPPCLK 1494

Query: 359  IGHRSFRRQ 385
            + H++F  Q
Sbjct: 1495 VTHKTFGTQ 1503


>UniRef50_Q4QA21 Cluster: Eukaryotic initiation factor 5a, putative;
           n=8; Trypanosomatidae|Rep: Eukaryotic initiation factor
           5a, putative - Leishmania major
          Length = 166

 Score = 32.3 bits (70), Expect = 6.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +3

Query: 9   LGVQLRTDFDSGKELLCTVLKSCGEECVIAVK 104
           L  Q++  FDSGKE+L  V+ + G E V+  K
Sbjct: 130 LAAQIKEQFDSGKEVLVVVVSAMGTEQVLQTK 161


>UniRef50_A5DN71 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 472

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 397 SIILDYVCILEVRAIYAFCQRVASSASLTYKRD 495
           S+IL     LEV+ I+ F +++A S    YKRD
Sbjct: 212 SVILSKAINLEVKVIFPFLRKIAESWDFVYKRD 244


>UniRef50_P80639 Cluster: Eukaryotic translation initiation factor
           5A; n=58; Eukaryota|Rep: Eukaryotic translation
           initiation factor 5A - Zea mays (Maize)
          Length = 160

 Score = 31.9 bits (69), Expect = 8.1
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 9   LGVQLRTDFDSGKELLCTVLKSCGEECVIAVK 104
           L  Q++  F+SGK+L+ TV  + GEE + A+K
Sbjct: 124 LVAQIKEGFESGKDLVVTVQSAMGEEQICALK 155


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,684,154
Number of Sequences: 1657284
Number of extensions: 9578655
Number of successful extensions: 19035
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19032
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28855457139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)