Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M08
         (495 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.5  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   3.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   3.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   4.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   4.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   4.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   4.6  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   6.1  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 221 YYVLHLCNMVFFSIVKKIISLL 156
           YY+ H+C  V   ++  I+ L+
Sbjct: 266 YYLSHVCQNVSTEVIGNILRLM 287


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 218 YVLHLCNMVFFSIVKKII 165
           YVL   N  FF +VK ++
Sbjct: 156 YVLFFVNFAFFVVVKMLL 173


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 218 YVLHLCNMVFFSIVKKII 165
           YVL   N  FF +VK ++
Sbjct: 156 YVLFFVNFAFFVVVKMLL 173



 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 354 VSSVTVHSGDSSDAFYNTGLC 416
           +S+VTV S  +   FYN  LC
Sbjct: 553 ISNVTVISWQAVCTFYNILLC 573


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 354 VSSVTVHSGDSSDAFYNTGLC 416
           +S+VTV S  +   FYN  LC
Sbjct: 233 ISNVTVISWQAVCTFYNILLC 253


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 354 VSSVTVHSGDSSDAFYNTGLC 416
           +S+VTV S  +   FYN  LC
Sbjct: 233 ISNVTVISWQAVCTFYNILLC 253


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 157 YYNPINAELVYLSRAVFALTAITHSSPQDFSTVHSNS 47
           Y+   + + ++ S    A  A + SSP   S  HS+S
Sbjct: 14  YHQQFHHQQLFQSATTEAPAAYSSSSPSGSSPQHSSS 50


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = -3

Query: 157 YYNPINAELVYLSRAVFALTAITHSSPQDFSTVHSNS 47
           Y+   + + ++ S    A  A + SSP   S  HS+S
Sbjct: 14  YHQQFHHQQLFQSATTEAPAAYSSSSPSGSSPQHSSS 50


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 466 WLPFDRKRRSLAPLIY 419
           W PFD K+  +  L+Y
Sbjct: 153 WFPFDYKQPVVFDLVY 168


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,859
Number of Sequences: 336
Number of extensions: 2783
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)