Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M06
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   0.51 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   0.89 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   4.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -1

Query: 464 LFVLPDC-NTLNTSASACALTFGIGTSHLPAFSLRFCLIIL 345
           L++   C NT+  S     +TF    S     SLRFCL IL
Sbjct: 284 LYICNQCYNTVEESRIFGLVTFTPDRSKFRPSSLRFCLNIL 324


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 0.89
 Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = +1

Query: 166 RGIKAKIYNKERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLS 345
           RG K  ++ KE + E ++ + KIK    + VK++++ +     P+ L+    + R K LS
Sbjct: 175 RGTKIVLHMKEDQTEFLE-EHKIK----EIVKKHSQFIG---YPIKLVVE--KEREKELS 224

Query: 346 N-MIKQKRKEKAGK-WDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVTK 492
           +   ++++KE+ G+  D   PK+    + E     +  K K+K  K   T+
Sbjct: 225 DDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTE 275


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 396 WYIPFTGFLFTFLFNHIRQDFGTRLDISV 310
           WY    G  F++LF  ++ D   + + S+
Sbjct: 338 WYFQICGSAFSYLFIMLQFDLNNKKNQSL 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,301
Number of Sequences: 336
Number of extensions: 2147
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)