Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M06
(503 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42723| Best HMM Match : No HMM Matches (HMM E-Value=.) 190 6e-49
SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_4487| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_41880| Best HMM Match : TolA (HMM E-Value=2.2) 32 0.31
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.54
SB_13494| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.94
SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09) 29 1.6
SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29) 29 1.6
SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14) 29 2.2
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 29 2.2
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 29 2.9
SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05) 29 2.9
SB_2163| Best HMM Match : TP2 (HMM E-Value=0.34) 29 2.9
SB_38133| Best HMM Match : TolA (HMM E-Value=0.38) 28 3.8
SB_59350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 3.8
SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064) 28 5.0
SB_18496| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_49010| Best HMM Match : G-patch (HMM E-Value=5.5e-19) 28 5.0
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 28 5.0
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_45938| Best HMM Match : Troponin (HMM E-Value=1) 27 6.6
SB_21477| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-06) 27 6.6
SB_4658| Best HMM Match : HTH_psq (HMM E-Value=0) 27 8.8
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_11171| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-14) 27 8.8
>SB_42723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 190 bits (463), Expect = 6e-49
Identities = 91/154 (59%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
Frame = +1
Query: 43 PQNEYIERHQKLYGRRLDYXXXXXXXXXXXXXXXXXXXXXLRGIKAKIYNKERRNEKIQM 222
PQNE+IE+ +K +G RLD+ L G+KAK+YNK+R EK+QM
Sbjct: 63 PQNEHIEQSRKRHGYRLDHFERKRKKEGRQPHEQAERAKKLHGLKAKLYNKKRHAEKVQM 122
Query: 223 KKKIKAHEEKNVK-QNTEKVSEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPI 399
KK +K HEEK K +N EKV EGA+P YLLDR+ QSRAKVLSNM+KQKRKEKAGKWDVP+
Sbjct: 123 KKTMKLHEEKKTKARNNEKVPEGAVPAYLLDREGQSRAKVLSNMVKQKRKEKAGKWDVPL 182
Query: 400 PKVRAQADAEVFKVLQSGKTKRKAWKRMVTKVTY 501
PKVRA + EVFKV+++GKT+RK WKRMVTK +
Sbjct: 183 PKVRAVGEDEVFKVIKTGKTRRKGWKRMVTKACF 216
>SB_26062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1535
Score = 31.9 bits (69), Expect = 0.31
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +1
Query: 163 LRGIKAKIYNKERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVL 342
LR K K+ N RR +KIQM+ + +EK +N + +G + RD++ ++L
Sbjct: 878 LRREKKKMKNW-RRTQKIQMRDDLFKLQEKLKSENVQAARQGYREILGTKRDLKLEKRLL 936
Query: 343 SNMIKQKRKEK 375
K +K K
Sbjct: 937 REQKKDLKKLK 947
>SB_4487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 31.9 bits (69), Expect = 0.31
Identities = 31/98 (31%), Positives = 53/98 (54%)
Frame = +1
Query: 205 NEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGK 384
NEKI KK + A EK + ++ + + G RD+ SRAKVL++ K+K+K+K GK
Sbjct: 25 NEKIS-KKSVLA--EKKMLKDEQGIPRGM-------RDLISRAKVLAS--KKKKKKKEGK 72
Query: 385 WDVPIPKVRAQADAEVFKVLQSGKTKRKAWKRMVTKVT 498
+ I + + F+ + G+ KR+ + R+ + T
Sbjct: 73 QALTIEQKKKAVLKSKFQ-RKVGEGKREFFNRIDHEAT 109
>SB_41880| Best HMM Match : TolA (HMM E-Value=2.2)
Length = 374
Score = 31.9 bits (69), Expect = 0.31
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +1
Query: 178 AKIYNKERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLSNMIK 357
+KI+ K+R EK KK ++EKNVK+N EK + + + V+ AK L
Sbjct: 275 SKIHKKDR--EKTPTKK----NKEKNVKKNEEKDVQKE-EEKDVQKKVEKSAKHLPQKKP 327
Query: 358 QKRKEKAGKWDVPIPKVRAQ-ADAEVFKVLQSGKTKR 465
+ +K + K D+ K++ Q +D E + ++ K K+
Sbjct: 328 ESKKHEQTKKDLKGRKLKRQLSDKEKIEEIKKEKLKK 364
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 31.1 bits (67), Expect = 0.54
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 172 IKAKIYNKERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPV---YLLDRDVQSRAKVL 342
IKAK + + R + + K E +N+K+N EK + PV + D+ S ++ L
Sbjct: 1241 IKAKFVDLKHRWDALNESVPAKKSEAENIKENIEKYNSAFQPVREAFTQAEDLLSFSEPL 1300
Query: 343 SNMIKQKRKEKAGK 384
K+ ++GK
Sbjct: 1301 DRKADVKQMNQSGK 1314
>SB_13494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 30.7 bits (66), Expect = 0.71
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 373 KAGKWDVPIPKVRAQADAEVFKVLQSGKTKRKAWKR 480
KAGK D I V+A D E+ V+++GK KR +W R
Sbjct: 203 KAGK-DQDITVVKAGKDQEII-VVKAGKIKRSSWSR 236
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 30.3 bits (65), Expect = 0.94
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 175 KAKIYNKERRNEKIQMKKKIKAHEEKNVKQNTEKVSEG-ALPVYLLDRDVQSRAKVL-SN 348
K K + K +++ + KKK K H+++ KQ T SE PV D D ++ K L
Sbjct: 1191 KKKKHKKHKKHGSAKHKKKDKKHKKQKEKQKTSDGSESDEAPVPREDDDNENLEKKLREK 1250
Query: 349 MIKQKRKEK 375
+ RK K
Sbjct: 1251 ALLSMRKHK 1259
>SB_43190| Best HMM Match : GKAP (HMM E-Value=1.6e-09)
Length = 816
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +1
Query: 175 KAKIYNKERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLSNMI 354
K + K R+N I+ K +K + K VK K E + + RAK+ + M
Sbjct: 460 KMEALEKRRQNNWIEEAKPVKK-KLKRVKPKVAKPDEAKAAAHAKSAVQEMRAKMRAKMA 518
Query: 355 KQKRK 369
+ KRK
Sbjct: 519 ENKRK 523
>SB_40923| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.29)
Length = 690
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 193 KERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGAL---PVYLLDRDVQSRAKVLSNMIKQK 363
K RN+ I++++K+KA EE+N ++ E S + + +L + K +++
Sbjct: 452 KNERNKIIELEEKLKALEEQNSQRQEEYDSNKSTHENELLVLKAKHEEELKETKQQLEEL 511
Query: 364 RKEKAGK 384
KEK+ K
Sbjct: 512 EKEKSEK 518
>SB_39938| Best HMM Match : ANF_receptor (HMM E-Value=6.4e-14)
Length = 966
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +1
Query: 196 ERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLSNMIKQKRKEK 375
E R+ + M +K ++ + ++ E+V+ L + +DV+ R K + +K KE
Sbjct: 649 EFRDHALYMLEKARSGIVE-AEEGMERVNPEKLETMV--KDVRKRTKEIVKSLKHFLKET 705
Query: 376 AGKWDVPIPKVRAQADAE 429
G+ D+P+P ++ E
Sbjct: 706 KGEVDIPLPPAPEVSEPE 723
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 187 YNKERRNEKIQMKKKI-KAHEEKNVKQNTEKVSEGALPVYLLD-RDVQSRA 333
YNK+R+ E + +K+ KA +++ K+ + E L + + R+ Q RA
Sbjct: 128 YNKKRKQESAKYTEKLKKAQDDEEAKKKANQQQESLLEMMKMQMREAQERA 178
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 193 KERRNEKIQMKKKIKAHEEKNVKQNTEKVS--EGALPVYLLDRDVQSRAKVLSNMIKQK 363
KE+ EK++ +K A E+K +N + VS E + L +++V K L + +QK
Sbjct: 298 KEKEKEKLEREKSSNAKEKKADPENDDDVSKEEVKKSINLANQNVDMLVKTLFDKGRQK 356
>SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05)
Length = 315
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/64 (29%), Positives = 33/64 (51%)
Frame = +1
Query: 193 KERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLSNMIKQKRKE 372
K +N+K +MKKK+K EK K +++ +G L D D + + + N I+ E
Sbjct: 215 KLSKNKKKKMKKKLKKQIEKQ-KLQQDEIEQGLLQ----DSDDKDKETLGDNCIESNDME 269
Query: 373 KAGK 384
++ K
Sbjct: 270 ESAK 273
>SB_2163| Best HMM Match : TP2 (HMM E-Value=0.34)
Length = 1074
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/64 (21%), Positives = 36/64 (56%)
Frame = +1
Query: 184 IYNKERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLSNMIKQK 363
++ ++ R K + K + H +N ++ ++K + ++ L++ +Q+RAK ++ K
Sbjct: 723 VHLRDSRLTKPTPEHKDQIHSSRNSERQSKKRNNLEKRLHELEKKLQTRAKSITPTRKHS 782
Query: 364 RKEK 375
RK++
Sbjct: 783 RKDR 786
>SB_38133| Best HMM Match : TolA (HMM E-Value=0.38)
Length = 2114
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 193 KERRNEKIQMKKKIKAHEEKNVKQNTEKVSE 285
K+ NE+ + KKK K +EE++ K+N ++ +E
Sbjct: 1892 KKEENEEEEKKKKKKENEEEDDKKNNKEENE 1922
>SB_59350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 987
Score = 28.3 bits (60), Expect = 3.8
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +1
Query: 208 EKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKW 387
EKI++K H NVK+ + + E +Y L + V + +I Q R +
Sbjct: 714 EKIEVKNVSSNHVGSNVKEGLDNMIERYSSLYALLKGVAWMMRFKKYLIHQVR--RPSNV 771
Query: 388 DVPIPKVRAQ----ADAEVFKVLQSGKTKRK 468
D+ I + AQ A+ E+ K +Q RK
Sbjct: 772 DLKIGDLTAQEISEAENEIVKYVQRQSFPRK 802
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.3 bits (60), Expect = 3.8
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +1
Query: 199 RRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKA 378
R + +Q+++++K ++ +Q +++ E + LL ++V R K I+Q+ +E+
Sbjct: 4777 RDHMDLQLQQQLKQQYKQVQEQFQQQLHEQQQKIQLL-QEVLERQKA---RIEQQSEEEV 4832
Query: 379 GKWDVPIPKVRAQADAEVFKVLQSGKTKRKAW 474
VP P A+ D F+ L+ +K + W
Sbjct: 4833 ----VPAPPTEAEGDNMSFEALKIAFSKLQGW 4860
>SB_25653| Best HMM Match : U-box (HMM E-Value=0.0064)
Length = 336
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 62 NAIKSFTADGLIMRRGNAKKKRVNPIRGLRRLVNYEVLKPRSTIRN 199
N + FTADGL+++ G KR R L+ L Y V P+ T++N
Sbjct: 296 NRDQIFTADGLLIKEGQMFGKR----RSLKDLETY-VEGPQKTLKN 336
>SB_18496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +2
Query: 62 NAIKSFTADGLIMRRGNAKKKRVNPIRGLRRLVNYEVLKPRSTIRN 199
N + FTADGL+++ G KR R L+ L Y V P+ T++N
Sbjct: 146 NRDQIFTADGLLIKEGQMFGKR----RSLKDLETY-VEGPQKTLKN 186
>SB_49010| Best HMM Match : G-patch (HMM E-Value=5.5e-19)
Length = 263
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 178 AKIYNKERRNEKIQMKKKIKAHEEKNVKQNTE 273
AK YNK+ R++ + K KIK +E+ +Q +
Sbjct: 34 AKQYNKDERHKVLNEKNKIKPIKEREKEQREQ 65
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/57 (21%), Positives = 29/57 (50%)
Frame = +1
Query: 259 KQNTEKVSEGALPVYLLDRDVQSRAKVLSNMIKQKRKEKAGKWDVPIPKVRAQADAE 429
+Q E+ +L+++ S+ + ++ + + +AG+W+VP ++ A A E
Sbjct: 1727 RQREEEQESERTSTQVLEKEPTSKKLKTTEAVETEARAEAGQWEVPEMEMNAAAGRE 1783
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.5 bits (58), Expect = 6.6
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +1
Query: 163 LRGIKAKIYNKERRNEKIQMKKKIKAHEEKNVKQNTE-KVSEGALPVYLLDRDVQSRAKV 339
LR K KI R E + KK KA++EK K E + +L L++ + R +
Sbjct: 1612 LRKAKEKIKQGSARQE--EQTKKYKAYQEKREKDVAELREKVQSLEKELMETSEKLREDL 1669
Query: 340 LSNMIKQ---KRKEKAGKW-DVPIPKVRAQADAEVFKVLQSGKTKRKAWK 477
+ ++ K K +AG+ + I K A+ AE +++Q+ +A+K
Sbjct: 1670 RGSEKREEELKLKLEAGESNNQAIDKKIAELSAEKQEIIQTSAKAEEAFK 1719
>SB_20265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 340 LSNMIKQKRKEKAGKWDVPIP 402
L M K RK +GKW +P+P
Sbjct: 276 LEIMEKSSRKNSSGKWQMPLP 296
>SB_45938| Best HMM Match : Troponin (HMM E-Value=1)
Length = 185
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/71 (25%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = +1
Query: 175 KAKIYNKERRNEKIQMKKKIKAHEEK--NVKQNTEKVSEGALPVYLLDRD-VQSRAKVLS 345
+AK YN + +E+ M+ K+K ++K N +Q E++ E L ++D ++ ++LS
Sbjct: 69 EAKAYNDQLESEREDMEYKVKDIKKKLSNERQRVEEL-EDELTSKKFEKDSIKQEVELLS 127
Query: 346 NMIKQKRKEKA 378
+ + +++A
Sbjct: 128 ATLSETDEQQA 138
>SB_21477| Best HMM Match : 7tm_1 (HMM E-Value=2.7e-06)
Length = 348
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -3
Query: 276 LFSVLFDIFLLMRFDLLFHLNLF-IATFLIVDLGFNTS 166
LF ++ L+ F + LN+F I TFLIVDL NT+
Sbjct: 146 LFFMVAVFLYLVLFTSVQLLNIFKIMTFLIVDLTLNTT 183
>SB_4658| Best HMM Match : HTH_psq (HMM E-Value=0)
Length = 1595
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/64 (23%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 193 KERRNEKIQMKKKIKAHEEKNVKQNTEKVSEGALPVYLLDRDVQ-SRAKVLSNMIKQKRK 369
+E + Q+KKK+K E+N+++ + V G +PV L + R + ++++ +
Sbjct: 753 QEESRKSGQLKKKLKKWSEENMERAIDAVERG-MPVRLASKQFHIPRTTLTCRRLRRENR 811
Query: 370 EKAG 381
+ G
Sbjct: 812 KVLG 815
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 154 PSQPSYGVHALLFCVSSPHNQAVCRKAFDGVQYIRS 47
P SY H + PH +C K F +Y+RS
Sbjct: 1986 PYYSSYYYHKMTHTKDRPHKCPLCGKGFIQTRYLRS 2021
>SB_11171| Best HMM Match : zf-C2H2 (HMM E-Value=1.1e-14)
Length = 199
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 154 PSQPSYGVHALLFCVSSPHNQAVCRKAFDGVQYIRS 47
P SY H + PH +C K F +Y+RS
Sbjct: 59 PYYSSYYYHKMTHTKDRPHKCPLCGKGFIQTRYLRS 94
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,284,277
Number of Sequences: 59808
Number of extensions: 269940
Number of successful extensions: 1035
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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