Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M05
         (545 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.23 
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   6.6  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   6.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.6  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.23
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 125  KSPFGGGRPGRVKRKNLRKGQGGGATNDEEE 33
            KS  GGG   R +++  R+G GG + ++EEE
Sbjct: 947  KSQGGGG--SRKRKEKARRGSGGDSDSEEEE 975


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -2

Query: 499 SATSVKCGASSTRSLASVRLPVNC*HSRRRILRDCLKAMLYYVVWLGSEC 350
           S T     ASS  +  + R P NC   R   L+  LK    Y  +   +C
Sbjct: 18  SRTDGNGAASSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRACQC 67


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 15/50 (30%), Positives = 20/50 (40%)
 Frame = -2

Query: 499 SATSVKCGASSTRSLASVRLPVNC*HSRRRILRDCLKAMLYYVVWLGSEC 350
           S T     ASS  +  + R P NC   R   L+  LK    Y  +   +C
Sbjct: 18  SRTDGNGAASSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRACQC 67


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 287 APRSPQSSNRAHNPVSSVSH 346
           AP  P S+  +H+PV + SH
Sbjct: 798 APPHPHSALSSHSPVGAGSH 817


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,909
Number of Sequences: 2352
Number of extensions: 10008
Number of successful extensions: 50
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)