Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M05
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   8.2  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   8.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.2  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +2

Query: 275 SEDGAPRSPQSSNR 316
           S +G+PRSP+S++R
Sbjct: 318 SNNGSPRSPESNSR 331


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 75  QVLPLDATGPAAAERRLQ 128
           +++ +D T P A ERR+Q
Sbjct: 375 KMVQVDPTAPNAEERRVQ 392


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 75  QVLPLDATGPAAAERRLQ 128
           +++ +D T P A ERR+Q
Sbjct: 290 KMVQVDPTAPNAEERRVQ 307


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 75  QVLPLDATGPAAAERRLQ 128
           +++ +D T P A ERR+Q
Sbjct: 609 KMVQVDPTAPNAEERRVQ 626


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,587
Number of Sequences: 438
Number of extensions: 2312
Number of successful extensions: 51
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)