Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M03
(403 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.85
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.85
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.85
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.85
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 0.85
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 22 2.0
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 22 2.0
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 2.0
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 22 2.0
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 21 3.4
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 21 3.4
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 21 4.5
EF222289-1|ABN79649.1| 68|Tribolium castaneum adipokinetic hor... 21 6.0
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 20 7.9
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 20 7.9
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.85
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -3
Query: 398 FDVIRMPRVMSLALFLDVEQHYHSCHEVHYLPSW 297
F+ I S+ L + V ++H ++H +P W
Sbjct: 278 FNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQW 311
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.85
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -3
Query: 398 FDVIRMPRVMSLALFLDVEQHYHSCHEVHYLPSW 297
F+ I S+ L + V ++H ++H +P W
Sbjct: 278 FNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQW 311
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.85
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -3
Query: 398 FDVIRMPRVMSLALFLDVEQHYHSCHEVHYLPSW 297
F+ I S+ L + V ++H ++H +P W
Sbjct: 278 FNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQW 311
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.85
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -3
Query: 398 FDVIRMPRVMSLALFLDVEQHYHSCHEVHYLPSW 297
F+ I S+ L + V ++H ++H +P W
Sbjct: 278 FNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQW 311
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 23.4 bits (48), Expect = 0.85
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -3
Query: 398 FDVIRMPRVMSLALFLDVEQHYHSCHEVHYLPSW 297
F+ I S+ L + V ++H ++H +P W
Sbjct: 278 FNCIMFMVASSVVLTVVVLNYHHRTADIHEMPQW 311
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 22.2 bits (45), Expect = 2.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 32 GRSEKKLAFSIH*RSDNVI 88
GR E+K+ S+H S+NVI
Sbjct: 231 GRKEQKVLKSLHSFSNNVI 249
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 22.2 bits (45), Expect = 2.0
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 104 YMPVQ*RGRVNEDVPPRPAGHYVRPKRPGGLGSC*SG 214
Y+P+ +G V + P + P GLG SG
Sbjct: 57 YLPMNMQGFVKQQTAPHGPPYAPHPSLSSGLGGGLSG 93
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.2 bits (45), Expect = 2.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 252 YGYRGKDC 275
YGY GKDC
Sbjct: 89 YGYTGKDC 96
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 22.2 bits (45), Expect = 2.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 32 GRSEKKLAFSIH*RSDNVI 88
GR E+K+ S+H S+NVI
Sbjct: 231 GRKEQKVLKSLHSFSNNVI 249
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 1 ARGRVGVYLCGQKRKKISFFN 63
A+GRV V++C K + N
Sbjct: 231 AKGRVAVWMCNNLHKALESRN 251
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.4 bits (43), Expect = 3.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 1 ARGRVGVYLCGQKRKKISFFN 63
A+GRV V++C K + N
Sbjct: 231 AKGRVAVWMCNNLHKALESRN 251
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 21.0 bits (42), Expect = 4.5
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 198 DPAKVAPPPQNKLKLEWVYGYRGKDCRSNLY 290
D + A PP + +W+YG G + Y
Sbjct: 85 DNKQQANPPISTEHCDWLYGIFGHETSCTRY 115
>EF222289-1|ABN79649.1| 68|Tribolium castaneum adipokinetic
hormone 2 protein.
Length = 68
Score = 20.6 bits (41), Expect = 6.0
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = +2
Query: 281 QLVSTPNWGDSVLRGSCGSAVQRRGTV 361
QL TPNWG G + T+
Sbjct: 20 QLNFTPNWGKRAPEGESNRCKESVDTI 46
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 20.2 bits (40), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 22 YLCGQKRKKISFFNTLTQRQ 81
YLC +R +I+ LT+RQ
Sbjct: 28 YLCRPRRIEIAASLDLTERQ 47
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 20.2 bits (40), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 22 YLCGQKRKKISFFNTLTQRQ 81
YLC +R +I+ LT+RQ
Sbjct: 159 YLCRPRRIEIAASLDLTERQ 178
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,358
Number of Sequences: 336
Number of extensions: 2434
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8646818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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