Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M03
         (403 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   2.4  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   2.4  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   3.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   4.2  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   4.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    22   7.3  
AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione S-tran...    22   7.3  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 218 RGHFSRIQ-DLPVAWAVHNDRPASEVHPH*PVLFIVLACMSN 96
           R    R+Q DL  AW +       ++ P  P L +V AC+S+
Sbjct: 169 RREAERLQFDLQGAWRISQANAEFKLCPSYPRLLLVPACISD 210


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = -3

Query: 218 RGHFSRIQ-DLPVAWAVHNDRPASEVHPH*PVLFIVLACMSN 96
           R    R+Q DL  AW +       ++ P  P L +V AC+S+
Sbjct: 169 RREAERLQFDLQGAWRISQANAEFKLCPSYPRLLLVPACISD 210


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 125 GRVNEDVPPRPAGHYVRPKRPG 190
           G   E  P  PAGH   P RPG
Sbjct: 158 GPKGEPGPKGPAGHPGAPGRPG 179


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -3

Query: 398 FDVIRMPRVMSLALFLDVEQHYHSCHEVHYLPSW 297
           F+ I      S+ L + V  ++H   ++H +P W
Sbjct: 298 FNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPW 331


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -3

Query: 398 FDVIRMPRVMSLALFLDVEQHYHSCHEVHYLPSW 297
           F+ I      S+ L + V  ++H   ++H +P W
Sbjct: 298 FNCIMFMVASSVVLTVVVLNYHHRTADIHEMPPW 331


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 125 GRVNEDVPPRPAGHYVRP 178
           G   +  PPRP G Y +P
Sbjct: 204 GTPTQPQPPRPGGMYPQP 221


>AF513636-1|AAM53608.1|  222|Anopheles gambiae glutathione
           S-transferase D6 protein.
          Length = 222

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 354 EQCQRHYTGHTDDVK 398
           EQC+R   G+TD  K
Sbjct: 191 EQCKRELVGYTDITK 205


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,846
Number of Sequences: 2352
Number of extensions: 11020
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)