Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M03
         (403 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030411-1|ABO52831.1| 1076|Drosophila melanogaster IP09257p pro...    97   1e-20
BT001524-1|AAN71279.1|  819|Drosophila melanogaster RE01752p pro...    97   1e-20
AE014296-2439|AAF49697.2|  819|Drosophila melanogaster CG13466-P...    97   1e-20
AE014134-2558|AAZ66469.1|  173|Drosophila melanogaster CG33679-P...    31   0.57 
X88928-1|CAA61369.1| 1092|Drosophila melanogaster DNA polymerase...    27   7.1  
AY113526-1|AAM29531.1| 1092|Drosophila melanogaster RE60511p pro...    27   7.1  
AE014296-2611|AAF49555.1| 1092|Drosophila melanogaster CG5949-PA...    27   7.1  

>BT030411-1|ABO52831.1| 1076|Drosophila melanogaster IP09257p
           protein.
          Length = 1076

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 38/61 (62%), Positives = 51/61 (83%)
 Frame = +3

Query: 219 PPQNKLKLEWVYGYRGKDCRSNLYLLPTGEIVYFVAAVVVLFNVEEQCQRHYTGHTDDVK 398
           PP  KL+L+WV+GYRG D R NL++LP+GE++Y+VAAV VLF+ +E  QRHYTGHT+D+ 
Sbjct: 472 PPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYTGHTEDIM 531

Query: 399 C 401
           C
Sbjct: 532 C 532


>BT001524-1|AAN71279.1|  819|Drosophila melanogaster RE01752p
           protein.
          Length = 819

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 38/61 (62%), Positives = 51/61 (83%)
 Frame = +3

Query: 219 PPQNKLKLEWVYGYRGKDCRSNLYLLPTGEIVYFVAAVVVLFNVEEQCQRHYTGHTDDVK 398
           PP  KL+L+WV+GYRG D R NL++LP+GE++Y+VAAV VLF+ +E  QRHYTGHT+D+ 
Sbjct: 215 PPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYTGHTEDIM 274

Query: 399 C 401
           C
Sbjct: 275 C 275


>AE014296-2439|AAF49697.2|  819|Drosophila melanogaster CG13466-PA
           protein.
          Length = 819

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 38/61 (62%), Positives = 51/61 (83%)
 Frame = +3

Query: 219 PPQNKLKLEWVYGYRGKDCRSNLYLLPTGEIVYFVAAVVVLFNVEEQCQRHYTGHTDDVK 398
           PP  KL+L+WV+GYRG D R NL++LP+GE++Y+VAAV VLF+ +E  QRHYTGHT+D+ 
Sbjct: 215 PPDKKLQLQWVHGYRGIDARRNLWVLPSGELLYYVAAVAVLFDRDEDAQRHYTGHTEDIM 274

Query: 399 C 401
           C
Sbjct: 275 C 275


>AE014134-2558|AAZ66469.1|  173|Drosophila melanogaster CG33679-PA
           protein.
          Length = 173

 Score = 31.1 bits (67), Expect = 0.57
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 54  LFQYINAATMSFTSITHTCQYNEE 125
           +F Y   A M F++I HTC YN++
Sbjct: 101 VFYYFYTAFMPFSNINHTCPYNDD 124


>X88928-1|CAA61369.1| 1092|Drosophila melanogaster DNA polymerase
           delta protein.
          Length = 1092

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 326 CH--EVHYLPSWE*I--QVAPAILTPVSIDPFEFEFILWRRGH 210
           CH  E   L  W     +V P ILT  +I+ F+F ++L R  H
Sbjct: 354 CHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAH 396


>AY113526-1|AAM29531.1| 1092|Drosophila melanogaster RE60511p
           protein.
          Length = 1092

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 326 CH--EVHYLPSWE*I--QVAPAILTPVSIDPFEFEFILWRRGH 210
           CH  E   L  W     +V P ILT  +I+ F+F ++L R  H
Sbjct: 354 CHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAH 396


>AE014296-2611|AAF49555.1| 1092|Drosophila melanogaster CG5949-PA
           protein.
          Length = 1092

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 326 CH--EVHYLPSWE*I--QVAPAILTPVSIDPFEFEFILWRRGH 210
           CH  E   L  W     +V P ILT  +I+ F+F ++L R  H
Sbjct: 354 CHDKETQMLDKWSAFVREVDPDILTGYNINNFDFPYLLNRAAH 396


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,734,370
Number of Sequences: 53049
Number of extensions: 470494
Number of successful extensions: 1325
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)