Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M02
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   3.1  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.1  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   4.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   5.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   7.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   7.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   7.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   9.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   9.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   9.5  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 165 SGEDWTPDADSNEPAPRSGRKR 230
           SG+   P +DS     R+G KR
Sbjct: 22  SGQQHGPQSDSRNQQLRTGEKR 43


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 99  LKKNDEDSDGSEQGGEPEEFQDSG 170
           L +N++DS G   GG   +  D G
Sbjct: 84  LGENNDDSGGGRGGGRDGDRGDGG 107


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -3

Query: 135 VQNHQSLHRFSSMTCVYA 82
           +++H +++R+S   C YA
Sbjct: 278 MKSHSNVYRYSCRDCSYA 295


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = -3

Query: 135 VQNHQSLHRFSSMTCVYA 82
           +++H +++R+S   C YA
Sbjct: 36  MKSHSNVYRYSCRDCSYA 53


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 85  RIFVVVYSKPTVNK 44
           R+F   Y+KP ++K
Sbjct: 318 RVFATFYNKPLIHK 331


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 46  YLLLVCYIQLQICVNASH 99
           +LLL+ +  LQI V   H
Sbjct: 203 FLLLITFTSLQIMVYLQH 220


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 46  YLLLVCYIQLQICVNASH 99
           +LLL+ +  LQI V   H
Sbjct: 203 FLLLITFTSLQIMVYLQH 220


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 46  YLLLVCYIQLQICVNASH 99
           +LLL+ +  LQI V   H
Sbjct: 523 FLLLITFTSLQIMVYLQH 540


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 96  SLKKNDEDSDGSEQG 140
           S   NDED D  E G
Sbjct: 192 SSTNNDEDDDDEETG 206


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 96  SLKKNDEDSDGSEQG 140
           S   NDED D  E G
Sbjct: 192 SSTNNDEDDDDEETG 206


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/15 (53%), Positives = 8/15 (53%)
 Frame = +3

Query: 96  SLKKNDEDSDGSEQG 140
           S   NDED D  E G
Sbjct: 192 SSTNNDEDDDDEETG 206


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,212
Number of Sequences: 336
Number of extensions: 1314
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)