Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_M02
(374 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 31 0.29
02_05_0509 - 29630224-29630328,29630408-29630500,29630669-296307... 31 0.39
01_06_1577 - 38379951-38380167,38380349-38380543,38380919-383811... 31 0.39
09_06_0241 + 21803476-21803604,21804968-21805026,21805117-21805444 30 0.68
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 29 0.90
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 29 1.2
11_06_0614 - 25530782-25531018,25532053-25532235 29 1.6
09_04_0377 + 17086775-17088310 28 2.1
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 28 2.1
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583... 28 2.7
01_06_1357 + 36632992-36633621,36634003-36635136,36635525-366361... 28 2.7
11_06_0080 - 19880319-19880957,19881800-19881948,19882266-198835... 27 3.6
04_03_0777 - 19492053-19492091,19492356-19492934 27 3.6
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 27 3.6
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225... 27 3.6
05_01_0324 + 2549354-2549482,2550092-2550493,2550789-2551727 27 4.8
04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864 27 4.8
04_04_0625 + 26682725-26683066,26683555-26683659,26683790-266839... 27 4.8
03_05_1070 + 30125131-30127029 27 4.8
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 27 4.8
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 27 4.8
01_03_0137 - 12904727-12904981,12907192-12907605 27 4.8
09_01_0126 + 1896155-1896253,1897425-1897969,1898303-1898384,189... 27 6.3
08_02_1490 + 27495155-27495334,27495437-27495746,27495865-274959... 27 6.3
08_01_0831 + 8086470-8087354,8087441-8087730,8096373-8096412,809... 27 6.3
06_03_0502 + 21493442-21494341 27 6.3
05_01_0210 + 1583176-1584177 27 6.3
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 27 6.3
01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,334... 27 6.3
11_01_0678 - 5534879-5534883,5535430-5535529,5535638-5535799,553... 26 8.4
11_01_0650 - 5265106-5265305,5265972-5266049,5266391-5266544,526... 26 8.4
10_06_0157 + 11314030-11314261,11314447-11314634,11315003-11315434 26 8.4
09_06_0333 + 22385995-22386196,22386605-22386663,22387544-223877... 26 8.4
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 26 8.4
07_03_1228 - 25009736-25010965 26 8.4
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847... 26 8.4
01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 26 8.4
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 31.1 bits (67), Expect = 0.29
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +3
Query: 87 KRKSLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGR 224
K+ + +D D + E EF D G D PDA S+ P R GR
Sbjct: 617 KKHKVVYDDGDVERLHLKNEKWEFIDEGRDNNPDASSDMPHGRRGR 662
>02_05_0509 -
29630224-29630328,29630408-29630500,29630669-29630719,
29630864-29630930,29631181-29631227,29631300-29631350,
29631433-29631552,29632777-29632869,29633440-29633485,
29633577-29633629,29633800-29633839,29633938-29634623
Length = 483
Score = 30.7 bits (66), Expect = 0.39
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 111 DEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRKRT 233
++ DG E+ E ++ +D +D TPDA A G T
Sbjct: 130 EDGDDGEEEEEEDDDEEDDDDDSTPDASPRAEAKAEGESST 170
>01_06_1577 -
38379951-38380167,38380349-38380543,38380919-38381191,
38381281-38381455,38381925-38382035,38382120-38382390,
38382990-38383139,38383242-38384246
Length = 798
Score = 30.7 bits (66), Expect = 0.39
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 102 KKNDEDSDGSEQGGEPEEFQDSG-EDWTPDADSNEPAPRSGRK 227
KK+DE SDG + + E+ + SG +D T E SG K
Sbjct: 172 KKDDEQSDGERKDDQEEKAEGSGSKDTTDQPQIEETVDESGEK 214
>09_06_0241 + 21803476-21803604,21804968-21805026,21805117-21805444
Length = 171
Score = 29.9 bits (64), Expect = 0.68
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = +3
Query: 105 KNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRKR 230
++D+D DG ++ GE ++ +D ++ + D +E P S +K+
Sbjct: 133 EDDDDDDGGDEDGEDDDDEDDDDE---EDDDDEDQPPSKKKK 171
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 108 NDEDSDGSEQGGEPEEFQD--SGEDWTPDADSNEPAPRS 218
+DED D ++GG+ ++ ++ SG++ D D ++ P +
Sbjct: 86 DDEDDDEDDEGGDDDDAEEDFSGDEGGEDEDDDDDDPEA 124
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 29.5 bits (63), Expect = 0.90
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 75 TNMRKRKSLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAP 212
T + ++S + + +DSD S+ GG + + G T S++ P
Sbjct: 248 TKRKSKRSYRSSSDDSDSSKTGGSSSDSESEGRRTTRTKHSSKKDP 293
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 NDEDSDGSEQGGEPE-EFQDSGEDWTPDADSNEPAPRSGRKR 230
+DED DG + GE E E D E+ + D ++ P+ K+
Sbjct: 128 DDEDEDGDDDEGEGEGEDDDEDEEEEEEEDDDDDVPQPPAKK 169
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 111 DEDSDGSEQGGEPE-EFQDSGEDWTPDADSNEPAPRSGRKR 230
DED D E GE E + +D E+ D D + P P + +++
Sbjct: 131 DEDGDDDEGEGEGEDDDEDEEEEEEEDDDDDVPQPPAKKRK 171
>11_06_0614 - 25530782-25531018,25532053-25532235
Length = 139
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 75 TNMRKRKSLKKNDEDSDGSE 134
T+MRK K KKND+D D +
Sbjct: 36 TSMRKNKKKKKNDDDDDDDD 55
>09_04_0377 + 17086775-17088310
Length = 511
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 87 KRKSLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRKRT 233
+RK K ND S+GS + E SG +P DS + + S RKR+
Sbjct: 282 RRKKRKSNDTASEGSSE--EEAVAAASGSSPSPLRDSKKKSRSSRRKRS 328
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 102 KKND-EDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRK 227
++ND +SD E+ E + D G D D+D ++ + S RK
Sbjct: 573 EENDVSESDDDEELSEKLDDSDEGSDQDDDSDQDDKSKNSSRK 615
>03_05_0712 -
27057858-27057941,27058093-27058182,27058268-27058384,
27059759-27059866,27060314-27060406,27060499-27060669,
27061505-27061757,27061860-27062138,27062939-27063273,
27063364-27064332,27064711-27065182,27065243-27065291,
27066564-27066804,27067606-27067695,27068172-27068294,
27068365-27068418
Length = 1175
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 230 SFASTPGSRFIRIGIRRPILTRILKLFWLPSLFRTIRVFI 111
+FA+ PG++F I IR +LT I ++ + R FI
Sbjct: 747 AFATLPGNQFFGIPIRSSVLTTIPHVYPFEERVQMFREFI 786
>01_06_1357 +
36632992-36633621,36634003-36635136,36635525-36636193,
36636250-36636343,36636378-36636490
Length = 879
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 111 DEDSDGSEQGGEPEEFQDSGEDWTP 185
DED + G + E+ +DS DW P
Sbjct: 418 DEDGEAEATGSDSEDGEDSPYDWPP 442
>11_06_0080 - 19880319-19880957,19881800-19881948,19882266-19883589,
19883766-19883953,19884034-19884499
Length = 921
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 69 TTTNM--RKRKSLKKN--DEDSDGSEQGGEPEEFQDSGEDWTPDADSNE 203
+TTN+ + R +++KN D+D D ++ E EE +G P AD +
Sbjct: 860 STTNLSEQSRVAIQKNSNDDDDDDEDEWLEEEETGGAGNTMIPIADDED 908
>04_03_0777 - 19492053-19492091,19492356-19492934
Length = 205
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 111 DEDSDGSEQGGEPEEFQDSGEDWTPDADSNE 203
DED + E GG E+ D +D D D E
Sbjct: 71 DEDEEEEEGGGSDEDSSDDDDDDDDDDDDEE 101
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 84 RKRKSLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNE 203
+K +L+ N S +GG + DS E+ + D D+N+
Sbjct: 561 KKNLTLESNSTSQTLSSEGGAANDTSDSKENVSSDGDANK 600
>01_01_0272 -
2249662-2249721,2250110-2250335,2250419-2250615,
2250707-2250955,2251047-2251176,2251473-2251564,
2251735-2251855,2251940-2252028,2252149-2252271,
2252379-2252506,2253039-2253147,2253701-2254000
Length = 607
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +3
Query: 96 SLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAP-----RSGRK 227
S +DE + +E+ G E D GE P E +P RSGRK
Sbjct: 40 SSSSSDEGEEDAEEEGSGEVDDDDGEAAEPSGKEEEVSPVAAAARSGRK 88
>05_01_0324 + 2549354-2549482,2550092-2550493,2550789-2551727
Length = 489
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 66 YTTTNMRKRKSLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPR 215
YT N R+ ++ D+DS+ G E + D + D D+ + PR
Sbjct: 328 YTRDNNRRTADSRRWDDDSEIDVSGEEWDSDDDKDNVFDNDVDAPDEHPR 377
>04_04_1293 - 32418156-32418584,32420155-32420270,32421798-32421864
Length = 203
Score = 27.1 bits (57), Expect = 4.8
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +3
Query: 108 NDEDSDGSE--QGGEPEEFQDSGEDWTPDADSNEPAPRSGRKR 230
+D+D DG E G + EE ED D D + P RK+
Sbjct: 161 DDDDDDGGEDDDGVDEEEEDQDNEDDEEDDDEDSLQPPKKRKK 203
>04_04_0625 +
26682725-26683066,26683555-26683659,26683790-26683951,
26684042-26684102,26684798-26684922,26685532-26685603
Length = 288
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 87 KRKSLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRKR 230
KRKS + ++ GGE ++ ++S D + E A S R R
Sbjct: 65 KRKSRAADADEEYLPSDGGEDDDEEESSSTSDQDGEEEEDAEASSRSR 112
>03_05_1070 + 30125131-30127029
Length = 632
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +3
Query: 84 RKRKSLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNE 203
R+R+ ++ E S+ E+G E E +++ E+ + + E
Sbjct: 30 RRRRRRRRGSEGSNAGEEGDEQTEIEEAEEEEEDEEEEEE 69
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 102 KKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRKR 230
+++DE+ DG E + E + GED D + S KR
Sbjct: 64 EEDDEEEDGDEDDDDEEYSDEEGEDDEDDEGEEDEEDGSEPKR 106
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +3
Query: 123 DGSEQGGEPEEF---QDSGEDWTPDADSNEPAPRSGRKRT 233
DG +GGE +E + GE+ D D R G+++T
Sbjct: 90 DGESEGGEEDEHDGESEGGEEDKNDGDGGGQTRRMGKRKT 129
>01_03_0137 - 12904727-12904981,12907192-12907605
Length = 222
Score = 27.1 bits (57), Expect = 4.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 111 DEDSDGSEQGGEPEEFQDSGE 173
DE+ DG E+G + EE + GE
Sbjct: 63 DEEGDGEEEGDDEEEDAEEGE 83
>09_01_0126 +
1896155-1896253,1897425-1897969,1898303-1898384,
1898710-1898832
Length = 282
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 111 DEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRKRTS 236
DED DG GG P S T +A S++ PR ++ +S
Sbjct: 196 DEDPDG--NGGRPHPRYRSRSRGTREARSSKKTPRESKRLSS 235
>08_02_1490 +
27495155-27495334,27495437-27495746,27495865-27495965,
27496620-27496661,27496763-27496884,27496954-27497062,
27497309-27497362
Length = 305
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 108 NDEDSDGSEQGGEPEEFQDSGEDWTPDADSNE 203
+D+D D E G +P QD+ ED PD S E
Sbjct: 183 DDDDDDEDEDGDDP---QDAWEDVDPDEYSYE 211
>08_01_0831 +
8086470-8087354,8087441-8087730,8096373-8096412,
8096878-8096957,8099643-8099733,8099989-8100052,
8100553-8100818
Length = 571
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 75 TNMRKRKSLKKNDEDSDGSEQGGE 146
T RKRK + +DE DGS+ G +
Sbjct: 340 TGSRKRKLVLSDDEGDDGSKSGNK 363
>06_03_0502 + 21493442-21494341
Length = 299
Score = 26.6 bits (56), Expect = 6.3
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +3
Query: 129 SEQGGEPEEFQDSGEDWTPDADSNE 203
+++ EPEEF D +D P+ D ++
Sbjct: 221 ADEDPEPEEFDDEADDDEPEMDDDD 245
>05_01_0210 + 1583176-1584177
Length = 333
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +3
Query: 84 RKRKSLKKNDEDSDGSEQGGE-PEEFQDSGEDWTPDADSNEPAPRSGRKR 230
RK+ K D+D DG G E EE D D D S + +KR
Sbjct: 173 RKKVKGKDPDDDHDGGGDGDEDDEEEADQQVDEEDDGASGDTTRAGSKKR 222
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 26.6 bits (56), Expect = 6.3
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 105 KNDEDSDGSEQGGEPEEFQDSG-EDWTPDADS 197
++DE+ + E E + +D G EDWT + ++
Sbjct: 193 ESDEEDEHDESEDEESDIEDEGDEDWTSNGEA 224
>01_01_0450 -
3344203-3344259,3344339-3344506,3344743-3344956,
3345039-3345101,3345582-3345769,3345846-3346029,
3346535-3346606,3346676-3346787,3346878-3346953,
3347050-3347100,3347179-3347260,3347331-3347567,
3347650-3347772,3348141-3348326,3348680-3349625,
3350426-3350551,3350683-3350811,3350918-3351049,
3351167-3351301,3351450-3351575,3352080-3352148,
3352149-3352205,3352302-3352436,3352600-3352704,
3352841-3352906,3353333-3353503,3353806-3353983
Length = 1395
Score = 26.6 bits (56), Expect = 6.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 102 KKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRKRT 233
K+N ++S G + GEP+ + G T A + PA + RK T
Sbjct: 644 KENIQNSTGLRKEGEPDLLKSRGNSKTEPAQFSIPA-KPDRKHT 686
>11_01_0678 -
5534879-5534883,5535430-5535529,5535638-5535799,
5536000-5536966,5537444-5537561,5538682-5538871,
5538952-5539107,5539296-5540315
Length = 905
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = +3
Query: 105 KNDEDSDGSEQGGEPEEFQDSGE---DWTPDADSN 200
+ +++SD G E +E D GE D D DSN
Sbjct: 110 RGEDESDEDSDGDESDEHSDDGESDDDSDEDEDSN 144
>11_01_0650 -
5265106-5265305,5265972-5266049,5266391-5266544,
5266635-5266701,5266723-5266796,5266910-5267794
Length = 485
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +3
Query: 102 KKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRK 227
+ D+D D E + +E +DS ED D D +E + G +
Sbjct: 439 RDGDDDEDSYEDDDDKDEDEDSYED-DDDEDEDEDSYEEGNE 479
>10_06_0157 + 11314030-11314261,11314447-11314634,11315003-11315434
Length = 283
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 108 NDEDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPRSGRKRTS 236
++++ +G E+ GE GE T D N P + RKR S
Sbjct: 213 DEDEEEGEEEAGETRR----GETTTWDGFENSPMSTNSRKRGS 251
>09_06_0333 +
22385995-22386196,22386605-22386663,22387544-22387762,
22387849-22388097
Length = 242
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 117 DSDGSEQGGEPEEFQDSGEDWTPDADSNE 203
D D GGEP + Q S DW +A +E
Sbjct: 61 DDDKPAAGGEPIQAQPSRLDWPEEAMGDE 89
>07_03_1774 +
29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 26.2 bits (55), Expect = 8.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 7 GFGRSVGFNFY*TYLLLVCYIQLQICVN 90
G G +G +FY L ++C+ QI N
Sbjct: 83 GLGAEIGSSFYPLTLFVLCFFLFQIAFN 110
>07_03_1228 - 25009736-25010965
Length = 409
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 66 YTTTNMRKRKSLKKNDEDSDGSEQGGEPEEFQDSGEDWTPDADSNE 203
Y T + + +DE + E+GGE EE ++ E+ + + E
Sbjct: 276 YETKVENTNEEMVDDDEGEEEPEEGGEEEEEEEEEEEEEEEEEPEE 321
>06_03_1011 -
26882011-26882157,26882576-26884248,26884607-26884783,
26885313-26885416,26885896-26886032
Length = 745
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 192 RHPASNPHQNLETLLAPLLVQNHQSLHRFSSM 97
R+P Q + LLAPLL H +H F +
Sbjct: 131 RYPELGYKQGMHELLAPLLYVLHADVHYFKQV 162
>01_02_0022 +
10290033-10290407,10290497-10290848,10290923-10291070,
10291145-10291225,10291651-10291822,10292120-10292158,
10292384-10292543,10292676-10292779,10292979-10293278
Length = 576
Score = 26.2 bits (55), Expect = 8.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 114 EDSDGSEQGGEPEEFQDSGEDWTPDADSNEPAPR 215
ED+ GS GG + Q+ G++ P D P P+
Sbjct: 265 EDTGGSIIGGTIKTIQERGKNPKPPRDPRLPTPK 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,317,453
Number of Sequences: 37544
Number of extensions: 129710
Number of successful extensions: 758
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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