Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M01
         (385 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   3.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   3.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   5.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   5.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   5.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   5.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   7.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   9.7  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 248 PLSTYLAFTSAFHCFPIVLFLWVIDIL 328
           P+S + +F S F C P   + + +  +
Sbjct: 68  PISAHFSFMSRFLCLPFYSYFFYLSYI 94


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 248 PLSTYLAFTSAFHCFPIVLFLWVIDIL 328
           P+S + +F S F C P   + + +  +
Sbjct: 24  PISAHFSFMSRFLCLPFYSYFFYLSYI 50


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 279 LSIVFLLSYFYG*STY 326
           ++I+F  SY YG  TY
Sbjct: 160 VTIIFFASYQYGTKTY 175


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 279 LSIVFLLSYFYG*STY 326
           ++I+F  SY YG  TY
Sbjct: 160 VTIIFFASYQYGTKTY 175


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 223 ILGQFFFGPLYMYY 182
           +  Q++ GPL MYY
Sbjct: 265 VYNQWWSGPLSMYY 278


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 327 NMSITHKNKTIGKQ 286
           N  + HK +T+GKQ
Sbjct: 54  NRRMKHKRQTLGKQ 67


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 327 NMSITHKNKTIGKQ 286
           N  + HK +T+GKQ
Sbjct: 2   NRRMKHKRQTLGKQ 15


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 327 NMSITHKNKTIGKQ 286
           N  + HK +T+GKQ
Sbjct: 185 NRRMKHKRQTLGKQ 198


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 163 YLYQCLSNTYTEAQKKTDL 219
           Y Y  LSN Y   + K +L
Sbjct: 248 YFYSHLSNPYPSEEAKEEL 266


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory
          receptor candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 9.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 50 VIFILPL*EYENLF 91
          ++FI PL +Y N+F
Sbjct: 12 IVFINPLVKYLNIF 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,382
Number of Sequences: 336
Number of extensions: 1762
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8014124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)