Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M01
         (385 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   1.7  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   6.7  
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    22   6.7  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 302 LFLWVIDILIGYNSVPVSLHLQVIYD 379
           LFLW+  I + + +  + L    +YD
Sbjct: 659 LFLWIFTIAVVFGTAGIILQAPTLYD 684


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 84   FSYSYNGSIKITH*NRIAKPL 22
            F   Y+  +K+T+ NR+ +P+
Sbjct: 1691 FLVMYDARVKVTYHNRMGRPV 1711


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 259 LPGVYVSFPLF 291
           +PGVYV+ P+F
Sbjct: 188 IPGVYVNVPMF 198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 364,551
Number of Sequences: 2352
Number of extensions: 6133
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)