Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_M01
         (385 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051740-1|AAH51740.1|  675|Homo sapiens SLC44A5 protein protein.      29   5.1  
BC034580-1|AAH34580.1|  675|Homo sapiens SLC44A5 protein protein.      29   5.1  
BC028743-1|AAH28743.1|  719|Homo sapiens solute carrier family 4...    29   5.1  
AK093170-1|BAC04084.1|  717|Homo sapiens protein ( Homo sapiens ...    29   5.1  
AK091400-1|BAC03655.1|  403|Homo sapiens protein ( Homo sapiens ...    29   5.1  

>BC051740-1|AAH51740.1|  675|Homo sapiens SLC44A5 protein protein.
          Length = 675

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 230 NRLFFNPLSTYLAFTSAFHCFPIVLFLWVIDILI 331
           N  F+   S Y  +   FH + + +FLW+I+ +I
Sbjct: 397 NFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVI 430


>BC034580-1|AAH34580.1|  675|Homo sapiens SLC44A5 protein protein.
          Length = 675

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 230 NRLFFNPLSTYLAFTSAFHCFPIVLFLWVIDILI 331
           N  F+   S Y  +   FH + + +FLW+I+ +I
Sbjct: 397 NFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVI 430


>BC028743-1|AAH28743.1|  719|Homo sapiens solute carrier family 44,
           member 5 protein.
          Length = 719

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 230 NRLFFNPLSTYLAFTSAFHCFPIVLFLWVIDILI 331
           N  F+   S Y  +   FH + + +FLW+I+ +I
Sbjct: 439 NFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVI 472


>AK093170-1|BAC04084.1|  717|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35851 fis, clone TESTI2007040, moderately
           similar to Homo sapiens CTL2 gene. ).
          Length = 717

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 230 NRLFFNPLSTYLAFTSAFHCFPIVLFLWVIDILI 331
           N  F+   S Y  +   FH + + +FLW+I+ +I
Sbjct: 439 NFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVI 472


>AK091400-1|BAC03655.1|  403|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34081 fis, clone FCBBF3004261, moderately
           similar to Homo sapiens CTL2 gene. ).
          Length = 403

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 230 NRLFFNPLSTYLAFTSAFHCFPIVLFLWVIDILI 331
           N  F+   S Y  +   FH + + +FLW+I+ +I
Sbjct: 123 NFAFYGGKSLYHQYIPTFHVYNLFVFLWLINFVI 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,695,451
Number of Sequences: 237096
Number of extensions: 868723
Number of successful extensions: 896
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)