Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L23
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   3.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   3.8  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   3.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   6.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   8.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   8.7  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 263 YRIIVINKGLFYLD 222
           YRIIV  K  +YLD
Sbjct: 477 YRIIVSTKDAWYLD 490


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 13  REEPSPPVAVDALPNMAQDPICE 81
           R+EP+   ++  L N A D IC+
Sbjct: 525 RQEPNMTDSLTRLANSALDNICQ 547


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 178 NPKQKEMHHLTHSTV 222
           NP   ++HH  H TV
Sbjct: 36  NPPSDKLHHPIHQTV 50


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -1

Query: 371 YERHHSICKTLR 336
           +ER+++ICK L+
Sbjct: 166 FERYYAICKPLK 177


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -1

Query: 371 YERHHSICKTLR 336
           +ER+++ICK L+
Sbjct: 166 FERYYAICKPLK 177


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/39 (25%), Positives = 14/39 (35%)
 Frame = +1

Query: 19  EPSPPVAVDALPNMAQDPICEKMVDLIPELPAVPELKTE 135
           EP P    ++ P  A +   E      P+    PE   E
Sbjct: 400 EPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESGNE 438


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 22  PSPPVAVDALPNMAQDP 72
           P PP  + A P  +Q P
Sbjct: 330 PPPPYQISAQPTPSQSP 346


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -1

Query: 200 CISFCFGF 177
           C +FCFGF
Sbjct: 526 CKNFCFGF 533


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 155 MMSSWPIKTQN 187
           M  +WP+K QN
Sbjct: 608 MRGAWPLKLQN 618


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,617
Number of Sequences: 336
Number of extensions: 1937
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)