Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L22
         (574 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.9  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 436 KTLLIYSKSYLKDLLLQSKFFLSSWKRFHRRITCYYVFCVI 558
           K + + SK +  D  L+      S+KR    ITC   F ++
Sbjct: 103 KLIEVISKLHKLDNKLKHMLIWKSYKRTQIFITCELFFVIL 143


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/41 (21%), Positives = 18/41 (43%)
 Frame = -3

Query: 149 LTMSRHKFCEKLCSCEVISMKQCMRNYISTIYNIHEYCTSI 27
           LT   + FC  L   +   +   +   I+ ++  H + TS+
Sbjct: 67  LTSFGYLFCASLSFYKAFKIGILLNQLITPLFFFHSFMTSV 107


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B
          protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 12 RYLIVNACAIFVYIIYCTNI 71
          RYL++   A+F++   C  +
Sbjct: 6  RYLLIATAALFLFFDLCHGV 25


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A
          protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 12 RYLIVNACAIFVYIIYCTNI 71
          RYL++   A+F++   C  +
Sbjct: 6  RYLLIATAALFLFFDLCHGV 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,999
Number of Sequences: 336
Number of extensions: 2382
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)