Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L22
         (574 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    24   3.1  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    24   4.0  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    24   4.0  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    24   4.0  
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    24   4.0  

>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +3

Query: 156 LHCIFSIHRSSSICQVKXXXXXXXXXXXTVIKSVFNKSPFKFNLN 290
           +H + SIH + +I Q             T+IKSV + +P  +  +
Sbjct: 43  IHHVGSIHAAPAIYQHSAPTIVKTIAQPTIIKSVEHHAPANYEFS 87


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 156 LHCIFSIHRSSSICQVKXXXXXXXXXXXTVIKSVFNKSPFKFNLN 290
           +H + S+H + +I Q             T+IKSV + +P  +  +
Sbjct: 43  IHHVGSVHAAPAIYQHSAPAIVKTIAQPTIIKSVEHHAPANYEFS 87


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 156 LHCIFSIHRSSSICQVKXXXXXXXXXXXTVIKSVFNKSPFKFNLN 290
           +H + S+H + +I Q             T+IKSV + +P  +  +
Sbjct: 43  IHHVGSVHAAPAIYQHSAPAIVKTIAQPTIIKSVEHHAPANYEFS 87


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 156 LHCIFSIHRSSSICQVKXXXXXXXXXXXTVIKSVFNKSPFKFNLN 290
           +H + S+H + +I Q             T+IKSV + +P  +  +
Sbjct: 43  IHHVGSVHAAPAIYQHSAPAIVKTIAQPTIIKSVEHHAPANYEFS 87


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.8 bits (49), Expect = 4.0
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = +3

Query: 156 LHCIFSIHRSSSICQVKXXXXXXXXXXXTVIKSVFNKSPFKFNLN 290
           +H + S+H + +I Q             T+IKSV + +P  +  +
Sbjct: 43  IHHVGSVHAAPAIYQHSAPAIVKTIAQPTIIKSVEHHAPANYEFS 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,040
Number of Sequences: 2352
Number of extensions: 9201
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)