Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L22
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.6  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   8.7  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 497 SCLLGKDSIDELLVTMYSV 553
           +CLL  D++ ++L   Y+V
Sbjct: 450 TCLLASDALKQILSAAYNV 468


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +2

Query: 497 SCLLGKDSIDELLVTMYSV 553
           +CLL  D++ ++L   Y+V
Sbjct: 488 TCLLASDALKQILSAAYNV 506


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 561 IYHTEYIVTSNSSMESFPRRQEEFT 487
           I H+E    +NSS  S   R+E+ T
Sbjct: 745 IVHSEASANANSSTSSEESREEKAT 769


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,503
Number of Sequences: 438
Number of extensions: 2712
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)