Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L21
(489 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0114 - 20942068-20942241,20942454-20942524,20942642-209426... 63 1e-10
11_04_0210 + 14882358-14882419,14882785-14882815,14884197-14884370 62 2e-10
07_01_0331 + 2343570-2344064 55 4e-08
09_02_0185 - 5500208-5500711 52 2e-07
07_03_1325 + 25830838-25831440 52 2e-07
07_01_0329 - 2318000-2318473 51 6e-07
09_02_0187 - 5533728-5534225 50 1e-06
06_01_0095 - 785876-786376 50 1e-06
07_01_0330 + 2319014-2319532 49 2e-06
09_04_0097 - 14573499-14574110,14574977-14575017,14575424-145756... 49 2e-06
10_08_0145 + 15181510-15181995,15182110-15182286 46 2e-05
08_02_0477 + 17618033-17618542 44 5e-05
08_02_0475 + 17610651-17611160 44 5e-05
09_02_0188 - 5540598-5541116 44 9e-05
09_02_0186 - 5520641-5521144 44 9e-05
02_02_0124 + 7023890-7024486 43 2e-04
07_03_1333 + 25861182-25861718 42 3e-04
07_03_0040 + 12723576-12724148 42 3e-04
07_03_1331 + 25851255-25851803 42 4e-04
09_02_0180 - 5417864-5418397 40 8e-04
09_02_0190 + 5556223-5556705 38 0.003
07_03_1332 + 25854171-25854695 38 0.003
03_01_0046 - 384444-384460,384649-384770,385144-385301,385379-38... 32 0.28
11_06_0553 - 24920428-24921057,24921149-24921276,24921372-249214... 29 1.5
07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331 29 2.6
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 27 8.1
>09_06_0114 -
20942068-20942241,20942454-20942524,20942642-20942660,
20944009-20944362
Length = 205
Score = 62.9 bits (146), Expect = 1e-10
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
+GKTPEEIRKTFNIKNDFT EE++VR+EN+W E
Sbjct: 171 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 205
>11_04_0210 + 14882358-14882419,14882785-14882815,14884197-14884370
Length = 88
Score = 62.5 bits (145), Expect = 2e-10
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
+GKTPEEIRKTFNIKNDFT EE+++R+EN+W E
Sbjct: 54 KGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 88
>07_01_0331 + 2343570-2344064
Length = 164
Score = 54.8 bits (126), Expect = 4e-08
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
+GK+PE+IRK F IKNDFT EE+++RKEN W E
Sbjct: 130 KGKSPEQIRKEFGIKNDFTPEEEEEIRKENTWAFE 164
>09_02_0185 - 5500208-5500711
Length = 167
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
+GKT +EIR TF I NDFT EE+++RKENEW E
Sbjct: 132 KGKTVQEIRDTFGIVNDFTPEEEEEIRKENEWAFE 166
>07_03_1325 + 25830838-25831440
Length = 200
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 112
+GKTPEEIRK FNI ND + EE+++R+EN W E+
Sbjct: 165 KGKTPEEIRKEFNIVNDLSKEEEEEIRRENPWAFEQ 200
>07_01_0329 - 2318000-2318473
Length = 157
Score = 50.8 bits (116), Expect = 6e-07
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
+GK+PE+IRK F IKNDFT EE+++RKEN W E
Sbjct: 124 KGKSPEQIRKEFGIKNDFT-PEEEEIRKENTWAFE 157
>09_02_0187 - 5533728-5534225
Length = 165
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
+GKT +EIR F I NDFT EE+++RKENEW E
Sbjct: 130 KGKTVQEIRDMFGIVNDFTPEEEEEIRKENEWAFE 164
>06_01_0095 - 785876-786376
Length = 166
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEW 100
+GK+PE+IR+ F IKND T EE+Q+RKE EW
Sbjct: 133 KGKSPEQIREMFGIKNDHTPEEEEQIRKEYEW 164
>07_01_0330 + 2319014-2319532
Length = 172
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 8 GKTPEEIRKTFNIKNDFTAAEEDQVRKENEW 100
GKTPE++R+TF+I+NDFT EE +R+EN W
Sbjct: 138 GKTPEQMRETFSIENDFTPEEEAAIRQENAW 168
>09_04_0097 -
14573499-14574110,14574977-14575017,14575424-14575616,
14575697-14575837,14575970-14576197,14576297-14576552,
14576866-14577069,14577157-14577245,14577346-14577416,
14577498-14577579,14577653-14577715,14578018-14578155
Length = 705
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +2
Query: 8 GKTPEEIRKTFNIKNDFTAAEEDQVRKENEW 100
GKT EEIR FNI NDFT EE ++RKEN W
Sbjct: 671 GKTVEEIRAEFNIANDFTPEEEAEIRKENAW 701
>10_08_0145 + 15181510-15181995,15182110-15182286
Length = 220
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2
Query: 8 GKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
GK PEEIR F I+ND+T +E +VR+EN W E
Sbjct: 186 GKKPEEIRDIFEIENDYTPEQEAEVRRENAWAFE 219
>08_02_0477 + 17618033-17618542
Length = 169
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2
Query: 20 EEIRKTFNIKNDFTAAEEDQVRKENEW 100
EE+R+ FNI NDFT EE +VRKEN W
Sbjct: 139 EEVREVFNITNDFTPEEEAEVRKENAW 165
>08_02_0475 + 17610651-17611160
Length = 169
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2
Query: 20 EEIRKTFNIKNDFTAAEEDQVRKENEW 100
EE+R+ FNI NDFT EE +VRKEN W
Sbjct: 139 EEVREVFNITNDFTPEEEAEVRKENAW 165
>09_02_0188 - 5540598-5541116
Length = 172
Score = 43.6 bits (98), Expect = 9e-05
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 17 PEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
PE++R+ F I+NDFT EE +VR EN W E
Sbjct: 141 PEQVREVFGIENDFTPEEEAEVRNENAWAYE 171
>09_02_0186 - 5520641-5521144
Length = 167
Score = 43.6 bits (98), Expect = 9e-05
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 17 PEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
PE++R+ F I+NDFT EE +VR EN W E
Sbjct: 136 PEQVREVFGIENDFTPEEEAEVRNENAWAYE 166
>02_02_0124 + 7023890-7024486
Length = 198
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 8 GKTPEEIRKTFNIKNDFTAAEEDQVRKENEW 100
G+T E IR+ F I ND+T EE VRKEN W
Sbjct: 161 GRTVEGIRQVFGIANDYTDEEEQDVRKENSW 191
>07_03_1333 + 25861182-25861718
Length = 178
Score = 41.9 bits (94), Expect = 3e-04
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEW 100
+GKTPEEIR FNI D T +++++++E+ W
Sbjct: 145 KGKTPEEIRTAFNIAYDLTEEDQEEIKEEDAW 176
>07_03_0040 + 12723576-12724148
Length = 190
Score = 41.9 bits (94), Expect = 3e-04
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENEW 100
+GKT EE+R+ NI+NDFT E+ ++++N W
Sbjct: 153 KGKTSEEMRQILNIRNDFTEEEDKAIKEQNPW 184
>07_03_1331 + 25851255-25851803
Length = 182
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +2
Query: 8 GKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK 112
GK +EIRK ++ DFT EE+++R+EN W E+
Sbjct: 148 GKAIDEIRKFLGVEKDFTKEEEEKIRRENAWAFEE 182
>09_02_0180 - 5417864-5418397
Length = 177
Score = 40.3 bits (90), Expect = 8e-04
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKENE 97
+GKT E++R+T I NDFT EE++ R+E+E
Sbjct: 143 KGKTSEQMRQTLGITNDFTPEEEEEFRREDE 173
>09_02_0190 + 5556223-5556705
Length = 160
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 8 GKTPEEIRKTFNIKNDFTAAEEDQVRKENEW 100
GK+PE++R+ F+I ND T EE ++R++ W
Sbjct: 127 GKSPEQMREIFHIVNDLTPEEEKEIREDIAW 157
>07_03_1332 + 25854171-25854695
Length = 174
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEEDQVRKEN 94
+GKTPEEIR F I+ D TA +E ++++E+
Sbjct: 142 KGKTPEEIRTAFGIEYDLTAQDEKEIKEED 171
>03_01_0046 -
384444-384460,384649-384770,385144-385301,385379-385479,
385748-385823,385983-386093,386165-386356,386729-387024,
388299-388497
Length = 423
Score = 31.9 bits (69), Expect = 0.28
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 5 EGKTPEEIRKTFNIKNDFTAAEE 73
EGKTPEEIR F++ +D T E+
Sbjct: 210 EGKTPEEIRDIFHLPDDLTEEEK 232
>11_06_0553 -
24920428-24921057,24921149-24921276,24921372-24921409,
24921522-24921734,24921906-24921998,24922089-24922276,
24922396-24922502,24922614-24922775,24922870-24922953,
24923060-24923168,24923340-24923468,24923504-24923556,
24923654-24923759,24924082-24924189
Length = 715
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 125 LVMYM*LSISLQFNFLNRSTTKPGINASFNCFPIVKFNCVIKVLSY 262
L + + LS+S+ F+FL G A NCFP+ + L++
Sbjct: 4 LTLSLSLSLSISFSFLELELCIDGHLAPLNCFPLTPSPLTVLALAF 49
>07_03_1327 + 25833927-25834391,25834943-25835340,25835395-25836331
Length = 599
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = +2
Query: 5 EGKTPEEIRKTFN-IKNDFTAAEEDQVRKENE 97
+ KT EEIRKTF+ I+ + + EE++ ++E E
Sbjct: 119 KAKTTEEIRKTFSTIEIELSDKEEEEQQQEEE 150
>06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 149 ISLQFNFLNRSTTKPGINASFNCFPIVKFNCVIKVLSYFLN---LVGLYS-LTISFGIIR 316
IS QF FL + +NA F I F V ++ + L L ++S +T+
Sbjct: 1521 ISRQFRFLGNTALDAALNAQF-LVQIGIFTAVPMIMGFILELGLLKAIFSFITMQLQFCS 1579
Query: 317 IFYKFSI 337
+F+ FS+
Sbjct: 1580 VFFTFSL 1586
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,131,930
Number of Sequences: 37544
Number of extensions: 138292
Number of successful extensions: 249
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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