Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L21
         (489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   4.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   4.0  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    21   9.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   9.3  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 17  PEEIRKTFNIKNDFTAAEEDQVRKENEWCEE 109
           PE  R    I  D+TA++ D   +   W E+
Sbjct: 172 PEGARVPIEIPRDYTASDLDVEHRVAYWRED 202


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 316 NILQIFHSLEGFSPFCIRYSSE*LWY*YNI 405
           NI  + H+L+ + P    YSS  +   +NI
Sbjct: 260 NIASVLHALQLYYPHVPEYSSSIIMELHNI 289


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +1

Query: 316 NILQIFHSLEGFSPFCIRYSSE*LWY*YNI 405
           NI  + H+L+ + P    YSS  +   +NI
Sbjct: 275 NIASVLHALQLYYPHVPEYSSSIIMELHNI 304


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 53  DFTAAEEDQVRKENEW 100
           D T  EED  R + +W
Sbjct: 491 DHTKREEDSTRVKEDW 506


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 147 VFHYNLTF*TGQLRNLALMPVSIVFLL 227
           VF YN+T  T  L+ L     +I+FLL
Sbjct: 112 VFTYNITNSTPLLKKLYGGNSTIIFLL 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,766
Number of Sequences: 438
Number of extensions: 1892
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)