Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L20
         (492 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    25   0.28 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.0  

>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 25.4 bits (53), Expect = 0.28
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 243 NKIFESKRLLLNYSVGCLNE 184
           ++I  SKRLLLNY + CL E
Sbjct: 44  DRILHSKRLLLNY-INCLLE 62


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 216 LLNYSVGCLNEVNSIQTQICC--PSIINNTLKLVFYKY 109
           L+++   CL  +N  Q  +    P I+ +T  +VFY Y
Sbjct: 16  LIDWYTVCLVPLNPYQFFLAVQYPRIVVSTFNIVFYMY 53


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
 Frame = +3

Query: 354 ELNYIIVNCLG---TWTTSLISVYALCAM*GDLISYINYSL 467
           ++NY+    LG    W T L     +C M   L+S IN  L
Sbjct: 498 KVNYVQEMNLGGVFIWATDLDDFKGVCGMKWPLLSTINRHL 538


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 79  FYKLISITFYIFIENKFK 132
           F+KL++   Y  +E K+K
Sbjct: 208 FFKLLTSKIYKVLEEKYK 225


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 380  AIYYNIIQLIILVRAFYTASS 318
            + YYNII ++  +   +T  S
Sbjct: 946  SFYYNIIPILFFMLVCFTCKS 966


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 380  AIYYNIIQLIILVRAFYTASS 318
            + YYNII ++  +   +T  S
Sbjct: 946  SFYYNIIPILFFMLVCFTCKS 966


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 380  AIYYNIIQLIILVRAFYTASS 318
            + YYNII ++  +   +T  S
Sbjct: 946  SFYYNIIPILFFMLVCFTCKS 966


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 380  AIYYNIIQLIILVRAFYTASS 318
            + YYNII ++  +   +T  S
Sbjct: 946  SFYYNIIPILFFMLVCFTCKS 966


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,069
Number of Sequences: 336
Number of extensions: 2169
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)