Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L19
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.14 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.4  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   5.4  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   5.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   5.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
 Frame = +3

Query: 114  NQIGAKFWEIISDEHGIDPTGAYHGDS-----DLQLERINVYYNEASG-GKYVPRAILVD 275
            N+I  + W +  D  G     AYHGD      D++  R    Y +  G G  V  A  +D
Sbjct: 911  NRIRNQRWIVNRDTSGATGPFAYHGDQWVGFEDIKSVRDKAEYIKTKGFGGAV--AWTID 968

Query: 276  LEP-------GTMDSVRSEPFGQIFLPDNVCFPD---SPAPVTTGPRDTT 395
            L+        G+   +RS   G   +PDN    D    P PVT  P   T
Sbjct: 969  LDDFSNRCCGGSFPLLRSLNRGLGLIPDNPSREDCTKPPEPVTPAPPQVT 1018


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 409 LSALCVVSLGPVVTGAGLSGKQT 341
           LS+     LG  V GAG SGK T
Sbjct: 269 LSSASNAKLGAPVKGAGNSGKYT 291


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 100 LECARSSFYFLF*FNKIVNKLLT 32
           L CA  SFY  F    ++N+L+T
Sbjct: 73  LFCASLSFYKAFKIGILLNQLIT 95


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 202 CKSESPWYAPVGSMPC 155
           C +E PW    G  PC
Sbjct: 351 CVNERPWSLYCGEPPC 366


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 403 ALCVVSLGPVVTGAGLSGK 347
           ALC++SLG  ++   L GK
Sbjct: 71  ALCLMSLGMFLSRVPLGGK 89


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 403 ALCVVSLGPVVTGAGLSGK 347
           ALC++SLG  ++   L GK
Sbjct: 71  ALCLMSLGMFLSRVPLGGK 89


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 330 LPDNVCFPDSPAPVTTGPRDTTQR 401
           L +  C PD P P+    RD + R
Sbjct: 180 LREERCDPDRPLPLDQKARDLSPR 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,243
Number of Sequences: 336
Number of extensions: 2305
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)