Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L19
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 166 8e-42
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 159 1e-39
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 156 9e-39
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 156 9e-39
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 152 2e-37
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 151 4e-37
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 112 1e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 112 1e-25
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 71 6e-13
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 71 6e-13
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 71 6e-13
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 70 1e-12
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 70 1e-12
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 69 2e-12
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 69 2e-12
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 68 4e-12
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 67 9e-12
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 67 9e-12
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 67 9e-12
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 67 9e-12
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 66 2e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 66 2e-11
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 62 3e-10
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 59 2e-09
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 5.1
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 166 bits (404), Expect = 8e-42
Identities = 75/87 (86%), Positives = 79/87 (90%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE+ISDEHGIDPTGAY+GDSDLQLERINVYYNEASGGKYVPRA LVDLEP
Sbjct: 11 QCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEASGGKYVPRACLVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVR+ PFGQ+F PDN F S A
Sbjct: 71 GTMDSVRAGPFGQLFRPDNFVFGQSGA 97
Score = 93.5 bits (222), Expect = 9e-20
Identities = 44/66 (66%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ESCDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 159 bits (386), Expect = 1e-39
Identities = 71/87 (81%), Positives = 76/87 (87%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE+ISDEHGI P G Y G+SDLQLERINVYYNEA+GGKYVPRA+LVDLEP
Sbjct: 11 QCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEANGGKYVPRAVLVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVRS PFGQ+F PDN F S A
Sbjct: 71 GTMDSVRSGPFGQLFRPDNFVFGQSGA 97
Score = 91.9 bits (218), Expect = 3e-19
Identities = 43/66 (65%), Positives = 45/66 (68%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+E CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 156 bits (379), Expect = 9e-39
Identities = 70/87 (80%), Positives = 75/87 (86%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+LVDLEP
Sbjct: 11 QCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVRS PFGQ+F PDN F S A
Sbjct: 71 GTMDSVRSGPFGQLFRPDNYVFGQSGA 97
Score = 89.4 bits (212), Expect = 1e-18
Identities = 43/66 (65%), Positives = 45/66 (68%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES DCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 156 bits (379), Expect = 9e-39
Identities = 70/87 (80%), Positives = 75/87 (86%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIG+KFWE+ISDEHGIDP+G Y GDSDLQLERINVYYNEA KYVPRA+LVDLEP
Sbjct: 11 QCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAGSNKYVPRAVLVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVRS PFGQ+F PDN F S A
Sbjct: 71 GTMDSVRSGPFGQLFRPDNYVFGQSGA 97
Score = 89.4 bits (212), Expect = 1e-18
Identities = 43/66 (65%), Positives = 45/66 (68%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAELVD+VLDVVRKE+ES DCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 152 bits (368), Expect = 2e-37
Identities = 67/87 (77%), Positives = 75/87 (86%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIG+KFWE+ISDEHGI P G + G+SDLQLERI+VYYNEA+ GKYVPRA+LVDLEP
Sbjct: 11 QCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANNGKYVPRAVLVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVRS PFGQ+F PDN F S A
Sbjct: 71 GTMDSVRSGPFGQLFRPDNFVFGQSGA 97
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/66 (63%), Positives = 45/66 (68%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 151 bits (365), Expect = 4e-37
Identities = 66/87 (75%), Positives = 75/87 (86%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIG+KFWE+ISDEHGI P G + G++DLQLERI+VYYNEA+ GKYVPRA+LVDLEP
Sbjct: 11 QCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANNGKYVPRAVLVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVRS PFGQ+F PDN F S A
Sbjct: 71 GTMDSVRSGPFGQLFRPDNFVFGQSGA 97
Score = 91.5 bits (217), Expect = 4e-19
Identities = 42/66 (63%), Positives = 45/66 (68%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAELVD+VLDV+RKE+E CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 112 bits (270), Expect = 1e-25
Identities = 51/87 (58%), Positives = 63/87 (72%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYVPRAILVDL+P
Sbjct: 11 QCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
+++ VRS +G++F P+N +S A
Sbjct: 71 ESINYVRSTQYGKLFDPENAVSGESGA 97
Score = 68.9 bits (161), Expect = 2e-12
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +2
Query: 350 SGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXX 529
SG+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+ D L+ FQ
Sbjct: 92 SGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLL 151
Query: 530 XXKIREE 550
K+REE
Sbjct: 152 ISKLREE 158
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 112 bits (270), Expect = 1e-25
Identities = 51/87 (58%), Positives = 63/87 (72%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE IS+EHG+ G Y GD+ QLERI YY E G KYVPRAILVDL+P
Sbjct: 11 QCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRKYVPRAILVDLDP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
+++ VRS +G++F P+N +S A
Sbjct: 71 ESINYVRSTQYGKLFDPENAVSGESGA 97
Score = 68.9 bits (161), Expect = 2e-12
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +2
Query: 350 SGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXX 529
SG+SGAGNNW++G+Y +GAE+VD VL V+R+E+E+ D L+ FQ
Sbjct: 92 SGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLL 151
Query: 530 XXKIREE 550
K+REE
Sbjct: 152 ISKLREE 158
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 74.5 bits (175), Expect = 5e-14
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVD 275
Q G QIG WE+ EHGI P G YH + D + E IN ++ E +GGK+VPR + VD
Sbjct: 17 QAGVQIGNACWELFCLEHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVD 75
Query: 276 LEPGTMDSVRSEPFGQIFLPDNV 344
LEP +D VR+ + +F P+ +
Sbjct: 76 LEPTVVDEVRTGTYRSLFHPEQL 98
Score = 47.2 bits (107), Expect = 8e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 308 GTFRTDIPA*QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GT+R+ ++L SG+ A N +A+G YT G E++D V+D V++ +E+C+ LQ F
Sbjct: 87 GTYRSLFHP-EQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 141
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 70.9 bits (166), Expect = 6e-13
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
Q G QIG WE+ EHGI P G D E ++++ G+YVPR+I VDLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNV 344
+D +R+ + ++F P+ +
Sbjct: 71 TVVDEIRTGTYKKLFHPEQM 90
Score = 53.6 bits (123), Expect = 9e-08
Identities = 21/46 (45%), Positives = 35/46 (76%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
+++ +G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQ F
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 70.9 bits (166), Expect = 6e-13
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAY-HGDSDLQLERINVYYNEASGGKYVPRAILVDLE 281
Q G QIG WE+ EHG+D G + + + + + +++E+ GK+VPRAI VDLE
Sbjct: 15 QAGAQIGNACWELYCIEHGLDEAGFLKEEEKNKKQQSLQAFFSESMNGKHVPRAIYVDLE 74
Query: 282 PGTMDSVRSEPFGQIFLPDNV 344
P +D +R+ +G +F PD +
Sbjct: 75 PTVLDEIRNGVYGNLFHPDQI 95
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/45 (51%), Positives = 35/45 (77%)
Frame = +2
Query: 341 RLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++ +G+ A NN+A+GHYT G EL+D VLD +RK++E+C+ LQ F
Sbjct: 94 QIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGF 138
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 70.9 bits (166), Expect = 6e-13
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
Q G QIG WE+ EHGI P G D E ++++ G+YVPR+I VDLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNV 344
+D +R+ + ++F P+ +
Sbjct: 71 TVVDEIRTGTYKKLFHPEQM 90
Score = 53.6 bits (123), Expect = 9e-08
Identities = 21/46 (45%), Positives = 35/46 (76%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
+++ +G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQ F
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 70.5 bits (165), Expect = 7e-13
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVDL 278
Q G QIG WE+ EHGI P G D+ +E N +++E GK+VPRAI VDL
Sbjct: 11 QAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGKHVPRAIFVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D VR+ + ++F P+ +
Sbjct: 71 EPTVIDEVRTGTYAKLFHPEQL 92
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++L SG+ A NN+A+GHYT G EL+D V+D VR+ +E C LQ F
Sbjct: 90 EQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGF 135
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 69.7 bits (163), Expect = 1e-12
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+LVDLEP
Sbjct: 14 QCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEP 72
Query: 285 GTMDSVRSEP-FGQIFLPDNVCFPD 356
++ + P F +F DN+ D
Sbjct: 73 RVINGMMQSPNFSNLFNTDNIFMSD 97
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 362 GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCL 466
GAGNNWA G Y +G E+ + ++D++ +E+E+ + L
Sbjct: 101 GAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNL 134
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 69.7 bits (163), Expect = 1e-12
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQ+ FW+ + DEHGI+ G + D+ ++ ++Y +A YVPRA+LVDLEP
Sbjct: 14 QCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY-QADDDHYVPRAVLVDLEP 72
Query: 285 GTMDSVRSEP-FGQIFLPDNVCFPD 356
++ + P F +F DN+ D
Sbjct: 73 RVINGMMQSPNFSNLFNTDNIFMSD 97
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = +2
Query: 362 GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCL 466
GAGNNWA G Y +G E+ + ++D++ +E+E+ + L
Sbjct: 101 GAGNNWASG-YCQGQEVQEKIMDIIIREAENTNNL 134
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 68.9 bits (161), Expect = 2e-12
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
Q G QIG WE+ EHGI P G S + E ++++ G+YVPR+I VDLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNV 344
+D +R+ + ++F P+ +
Sbjct: 71 TVVDEIRTGTYKKLFHPEQM 90
Score = 53.6 bits (123), Expect = 9e-08
Identities = 21/46 (45%), Positives = 35/46 (76%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
+++ +G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQ F
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 68.9 bits (161), Expect = 2e-12
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
Q G QIG WE+ EHGI P G S + E ++++ G+YVPR+I VDLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNV 344
+D +R+ + ++F P+ +
Sbjct: 71 TVVDEIRTGTYKKLFHPEQM 90
Score = 53.6 bits (123), Expect = 9e-08
Identities = 21/46 (45%), Positives = 35/46 (76%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
+++ +G+ A NN+A+GHYT G EL+D+VLD +R+ +++C LQ F
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGF 133
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 68.1 bits (159), Expect = 4e-12
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLE--RINVYYNEASGGKYVPRAILVDL 278
Q G Q+G WE+ EHGI P G + + L ++ N +++E GK+VPRAI+VDL
Sbjct: 16 QAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGKHVPRAIMVDL 75
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D +R+ + +F P+ +
Sbjct: 76 EPTPIDEIRTGTYKTLFHPEQL 97
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +2
Query: 308 GTFRTDIPA*QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GT++T ++L +G+ A NN+A+GHYT G E++D V+D VR+ E+C LQ F
Sbjct: 86 GTYKTLFHP-EQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGF 140
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 66.9 bits (156), Expect = 9e-12
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDL 278
Q G QIG WE+ EHGI P G D L + + +++E G++VPRA++VDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D +R+ + +F P+ +
Sbjct: 71 EPTVIDEIRTGTYRSLFHPEQL 92
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 308 GTFRTDIPA*QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GT+R+ ++L +G+ A NN+A+GHYT G E++D LD +R+ +++C LQ F
Sbjct: 81 GTYRSLFHP-EQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 66.9 bits (156), Expect = 9e-12
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDL 278
Q G QIG WE+ EHGI P G D L + + +++E G++VPRA++VDL
Sbjct: 10 QAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDL 69
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D +R+ + +F P+ +
Sbjct: 70 EPTVIDEIRTGTYRSLFHPEQL 91
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 308 GTFRTDIPA*QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GT+R+ ++L +G+ A NN+A+GHYT G E++D LD +R+ +++C LQ F
Sbjct: 80 GTYRSLFHP-EQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGF 134
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 66.9 bits (156), Expect = 9e-12
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDL 278
Q G QIG WE+ EHGI P G D L + + +++E G++VPRA++VDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D +R+ + +F P+ +
Sbjct: 71 EPTVIDEIRTGTYRSLFHPEQL 92
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 308 GTFRTDIPA*QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GT+R+ ++L +G+ A NN+A+GHYT G E++D LD +R+ +++C LQ F
Sbjct: 81 GTYRSLFHP-EQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 66.9 bits (156), Expect = 9e-12
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKYVPRAILVDL 278
Q G QIG WE+ EHGI P G D L + + +++E G++VPRA++VDL
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRAVMVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D +R+ + +F P+ +
Sbjct: 71 EPTVIDEIRTGTYRSLFHPEQL 92
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 308 GTFRTDIPA*QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GT+R+ ++L +G+ A NN+A+GHYT G E++D LD +R+ +++C LQ F
Sbjct: 81 GTYRSLFHP-EQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGF 135
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
Q G QIG WE+ EHGI P G + + ++++ G+YVPR+I VDLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNV 344
+D +R+ + ++F P+ +
Sbjct: 71 TVVDEIRTGNYKKLFHPEQM 90
Score = 52.0 bits (119), Expect = 3e-07
Identities = 20/46 (43%), Positives = 34/46 (73%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
+++ +G+ A NN+A+GHYT G EL+D+ LD +R+ +++C LQ F
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGF 133
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/80 (35%), Positives = 45/80 (56%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
Q G QIG WE+ EHGI P G + + ++++ G+YVPR+I VDLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGGSFTTFFSDTGNGRYVPRSIFVDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNV 344
+D +R+ + ++F P+ +
Sbjct: 71 TVVDEIRTGNYKKLFHPEQM 90
Score = 52.0 bits (119), Expect = 3e-07
Identities = 20/46 (43%), Positives = 34/46 (73%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
+++ +G+ A NN+A+GHYT G EL+D+ LD +R+ +++C LQ F
Sbjct: 88 EQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGF 133
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +3
Query: 153 EHGIDPTGAYHGDSDL---QLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSEPFGQ 323
EHGI P G YH + D + E IN ++ E +GGK+VPR + VDLEP +D VR+ +
Sbjct: 5 EHGIQPDG-YHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRS 63
Query: 324 IFLPDNV 344
+F P+ +
Sbjct: 64 LFHPEQL 70
Score = 47.2 bits (107), Expect = 8e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 308 GTFRTDIPA*QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GT+R+ ++L SG+ A N +A+G YT G E++D V+D V++ +E+C+ LQ F
Sbjct: 59 GTYRSLFHP-EQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGF 113
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/80 (35%), Positives = 46/80 (57%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
Q G QIG WE+ EHGI P G + D + ++++ G++VPR+I VDLEP
Sbjct: 11 QAGVQIGNACWELYCLEHGILPDGTSM-EPDGNSGSLGTFFSDTGYGRHVPRSIFVDLEP 69
Query: 285 GTMDSVRSEPFGQIFLPDNV 344
+D +R+ + ++F P+ +
Sbjct: 70 TVVDEIRTGAYKKLFHPEQM 89
Score = 51.2 bits (117), Expect = 5e-07
Identities = 19/46 (41%), Positives = 34/46 (73%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
+++ +G+ A NN+A+GHYT G E++D+ LD +R+ + +C+ LQ F
Sbjct: 87 EQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGF 132
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 257 GHVLASGGLIVINIDALKL---QVRIAVVCTGGVDAVLV 150
GH L GL ++N A L Q+ +A +C GG +A V
Sbjct: 347 GHPLGMSGLRIVNSLAYSLAPGQLGVAAICNGGGEATAV 385
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 141 IISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDL 278
I S+ H I T + H DS R + GG + R IL+D+
Sbjct: 101 IASEHHHISTTSSCHSDSGNSSSRDVITPFTVHGGASIGRLILIDI 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,368,227
Number of Sequences: 27780
Number of extensions: 218025
Number of successful extensions: 723
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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