Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L19
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.2  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   2.1  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   3.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   8.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.3  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -2

Query: 202 CKSESPWYAPVGSMPC 155
           CK +  WY P G   C
Sbjct: 234 CKGDGKWYLPSGGCHC 249


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 331 RNICPKGSERTESMVPGSR 275
           R I   GSER++S  PGSR
Sbjct: 70  REIEKLGSERSKSRSPGSR 88


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +2

Query: 413 VDSVLDVVRKESESCDCL 466
           +DS+++++R   ++CD L
Sbjct: 106 IDSIINIIRVRVDACDRL 123


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +3

Query: 294 DSVRSEPFGQIFLPDNVCFPDS 359
           D   SEPF  + LP     PDS
Sbjct: 311 DGATSEPFPFLMLPLGADDPDS 332


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +3

Query: 78  NEERAHSSRQCGNQIGAKFW 137
           N  R HS +   +  G+K W
Sbjct: 392 NNSRGHSGQSSSHHHGSKSW 411


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,020
Number of Sequences: 438
Number of extensions: 2468
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)