Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L19
(551 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 156 1e-38
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 152 1e-37
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 152 1e-37
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 152 2e-37
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 149 9e-37
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 149 1e-36
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 149 1e-36
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 147 5e-36
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 146 6e-36
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 72 3e-13
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 72 3e-13
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 71 4e-13
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 71 4e-13
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 71 4e-13
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 69 2e-12
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 69 2e-12
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 66 1e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 66 1e-11
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.1
At1g49570.1 68414.m05558 peroxidase, putative identical to perox... 28 4.8
At5g53100.1 68418.m06597 oxidoreductase, putative similar to for... 27 6.3
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 8.3
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 156 bits (378), Expect = 1e-38
Identities = 69/88 (78%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKYVPRAILVDLE 281
QCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+YVPRA+L+DLE
Sbjct: 11 QCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAVLMDLE 70
Query: 282 PGTMDSVRSEPFGQIFLPDNVCFPDSPA 365
PGTMDS+RS P+GQIF PDN F S A
Sbjct: 71 PGTMDSIRSGPYGQIFRPDNFVFGQSGA 98
Score = 91.1 bits (216), Expect = 5e-19
Identities = 42/66 (63%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQ FQ
Sbjct: 94 GQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 153
Query: 533 XKIREE 550
KIREE
Sbjct: 154 SKIREE 159
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 152 bits (369), Expect = 1e-37
Identities = 67/87 (77%), Positives = 76/87 (87%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YVPRAIL+DLEP
Sbjct: 11 QCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYVPRAILMDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVR+ P+GQIF PDN F S A
Sbjct: 71 GTMDSVRTGPYGQIFRPDNFVFGQSGA 97
Score = 91.1 bits (216), Expect = 5e-19
Identities = 42/66 (63%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 152 bits (369), Expect = 1e-37
Identities = 69/88 (78%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKYVPRAILVDLE 281
QCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+YVPRA+L+DLE
Sbjct: 11 QCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRYVPRAVLMDLE 70
Query: 282 PGTMDSVRSEPFGQIFLPDNVCFPDSPA 365
PGTMDS+RS PFGQIF PDN F S A
Sbjct: 71 PGTMDSIRSGPFGQIFRPDNFVFGQSGA 98
Score = 91.1 bits (216), Expect = 5e-19
Identities = 42/66 (63%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E+CDCLQ FQ
Sbjct: 94 GQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 153
Query: 533 XKIREE 550
KIREE
Sbjct: 154 SKIREE 159
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 152 bits (368), Expect = 2e-37
Identities = 69/87 (79%), Positives = 75/87 (86%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYVPRA+L+DLEP
Sbjct: 11 QCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYVPRAVLMDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDS+RS PFGQIF PDN F S A
Sbjct: 71 GTMDSLRSGPFGQIFRPDNFVFGQSGA 97
Score = 88.2 bits (209), Expect = 3e-18
Identities = 42/66 (63%), Positives = 45/66 (68%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+ DCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 149 bits (362), Expect = 9e-37
Identities = 68/87 (78%), Positives = 74/87 (85%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYVPRA+L+DLEP
Sbjct: 11 QCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYVPRAVLMDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDS+RS PFGQIF PDN F S A
Sbjct: 71 GTMDSLRSGPFGQIFRPDNFVFGQSGA 97
Score = 92.3 bits (219), Expect = 2e-19
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 149 bits (361), Expect = 1e-36
Identities = 66/87 (75%), Positives = 74/87 (85%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++VPRA+L+DLEP
Sbjct: 11 QCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDS+RS P+GQ F PDN F S A
Sbjct: 71 GTMDSLRSGPYGQTFRPDNFVFGQSGA 97
Score = 92.3 bits (219), Expect = 2e-19
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 149 bits (361), Expect = 1e-36
Identities = 66/87 (75%), Positives = 74/87 (85%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++VPRA+L+DLEP
Sbjct: 11 QCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDS+RS P+GQ F PDN F S A
Sbjct: 71 GTMDSLRSGPYGQTFRPDNFVFGQSGA 97
Score = 92.3 bits (219), Expect = 2e-19
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 147 bits (356), Expect = 5e-36
Identities = 65/87 (74%), Positives = 75/87 (86%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YVPRA+L+DLEP
Sbjct: 11 QCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYVPRAVLMDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVRS P+GQIF PDN F S A
Sbjct: 71 GTMDSVRSGPYGQIFRPDNFVFGQSGA 97
Score = 92.3 bits (219), Expect = 2e-19
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 146 bits (355), Expect = 6e-36
Identities = 64/87 (73%), Positives = 74/87 (85%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++VPRA+L+DLEP
Sbjct: 11 QCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFVPRAVLMDLEP 70
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPDSPA 365
GTMDSVRS P+GQIF PDN F S A
Sbjct: 71 GTMDSVRSGPYGQIFRPDNFVFGQSGA 97
Score = 92.3 bits (219), Expect = 2e-19
Identities = 43/66 (65%), Positives = 46/66 (69%)
Frame = +2
Query: 353 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*FQXXXXXXXXXXXXXXXXXX 532
GQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E+CDCLQ FQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLI 152
Query: 533 XKIREE 550
KIREE
Sbjct: 153 SKIREE 158
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 71.7 bits (168), Expect = 3e-13
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDL 278
Q G Q+G WE+ EHGI P G D+ + + + N +++E GK+VPRA+ VDL
Sbjct: 11 QAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D VR+ + Q+F P+ +
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQL 92
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++L SG+ A NN+A+GHYT G E+VD LD VRK +++C LQ F
Sbjct: 90 EQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF 135
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 71.7 bits (168), Expect = 3e-13
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDL 278
Q G Q+G WE+ EHGI P G D+ + + + N +++E GK+VPRA+ VDL
Sbjct: 11 QAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D VR+ + Q+F P+ +
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQL 92
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++L SG+ A NN+A+GHYT G E+VD LD VRK +++C LQ F
Sbjct: 90 EQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGF 135
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 71.3 bits (167), Expect = 4e-13
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDL 278
Q G Q+G WE+ EHGI P G GD + + N +++E GK+VPRA+ VDL
Sbjct: 11 QAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D VR+ + Q+F P+ +
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQL 92
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++L SG+ A NN+A+GHYT G E+VD LD +RK +++C LQ F
Sbjct: 90 EQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 71.3 bits (167), Expect = 4e-13
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDL 278
Q G Q+G WE+ EHGI P G GD + + N +++E GK+VPRA+ VDL
Sbjct: 11 QAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D VR+ + Q+F P+ +
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQL 92
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++L SG+ A NN+A+GHYT G E+VD LD +RK +++C LQ F
Sbjct: 90 EQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 71.3 bits (167), Expect = 4e-13
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDL 278
Q G Q+G WE+ EHGI P G DS + + N +++E S G++VPRA+ +DL
Sbjct: 11 QAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D VR+ + Q+F P+ +
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQL 92
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++L SG+ A NN+A+GHYT G E+VD+ L+ +RK +++C LQ F
Sbjct: 90 EQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGF 135
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDL 278
Q G Q+G WE+ EHGI P G D + + N +++E GK+VPRA+ VDL
Sbjct: 11 QAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D VR+ + Q+F P+ +
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQL 92
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++L SG+ A NN+A+GHYT G E+VD LD +RK +++C LQ F
Sbjct: 90 EQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILVDL 278
Q G Q+G WE+ EHGI P G D + + N +++E GK+VPRA+ VDL
Sbjct: 11 QAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDL 70
Query: 279 EPGTMDSVRSEPFGQIFLPDNV 344
EP +D VR+ + Q+F P+ +
Sbjct: 71 EPTVIDEVRTGTYRQLFHPEQL 92
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +2
Query: 338 QRLFSGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
++L SG+ A NN+A+GHYT G E+VD LD +RK +++C LQ F
Sbjct: 90 EQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGF 135
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.5 bits (155), Expect = 1e-11
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIG +FW+ + EHGI G + +R +V++ +A Y+PRA+L+DLEP
Sbjct: 12 QCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEP 71
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPD 356
++ +++ + ++ +N+ D
Sbjct: 72 RVINGIQNGEYRNLYNHENIFLSD 95
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 362 GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GAGNNWA G Y +G + + ++D++ +E++ D L+ F
Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGF 135
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.1 bits (154), Expect = 1e-11
Identities = 28/84 (33%), Positives = 50/84 (59%)
Frame = +3
Query: 105 QCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEP 284
QCGNQIG +FW+ + EHGI G + +R +V++ +A Y+PRA+L+DLEP
Sbjct: 12 QCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIPRALLIDLEP 71
Query: 285 GTMDSVRSEPFGQIFLPDNVCFPD 356
++ +++ + ++ +N+ D
Sbjct: 72 RVINGIQNGDYRNLYNHENIFVAD 95
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 362 GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQ*F 475
GAGNNWA G Y +G + + ++D++ +E++ D L+ F
Sbjct: 99 GAGNNWASG-YHQGKGVEEEIMDMIDREADGSDSLEGF 135
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2
Query: 410 LVDSVLDVVRKESESCDCLQ*F 475
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At1g49570.1 68414.m05558 peroxidase, putative identical to
peroxidase ATP5a [Arabidopsis thaliana]
gi|1546702|emb|CAA67341; similar to peroxidase
SWISS-PROT:P80679 from [Armoracia rusticana]
Length = 350
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -1
Query: 302 NRVHGAGLEVDEDGAGHVLASGGLIVINIDALKLQVRIAVVCTGG 168
NR G EV ED + +S L V D + L R AVV TGG
Sbjct: 116 NRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGG 160
>At5g53100.1 68418.m06597 oxidoreductase, putative similar to
forever young oxidoreductase (FEY3) GI:12004621 from
[Arabidopsis thaliana]
Length = 364
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 209 LKLQVRIAVVCTG-GVDAVLVGDDLPEFGSDLVTALP 102
L L+ I+VVC GV + DLP DL +ALP
Sbjct: 234 LPLETGISVVCLSPGVVQTNITRDLPRLVQDLYSALP 270
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +3
Query: 123 GAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVPRAILV 272
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,725,167
Number of Sequences: 28952
Number of extensions: 204101
Number of successful extensions: 610
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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