BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L18
(407 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119552-1|AAM50206.1| 321|Drosophila melanogaster GH27568p pro... 62 2e-10
AE014298-2011|AAF48353.2| 321|Drosophila melanogaster CG32597-P... 62 2e-10
AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-P... 28 5.4
AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-P... 28 5.4
AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-P... 28 5.4
AE014298-3084|AAF50855.3| 447|Drosophila melanogaster CG33670-P... 27 7.2
>AY119552-1|AAM50206.1| 321|Drosophila melanogaster GH27568p
protein.
Length = 321
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +1
Query: 13 DKQETPNSEKDIRAKLDMATKSRFERNWHNTLHFVHWCRYGETPQEARMRQISLTTSKTP 192
DK++ P++EKDIR ++ +A K++ + W+N HFV+WCRYG Q+ R RQ+ TTS
Sbjct: 258 DKEKVPHNEKDIRNQVSVARKAK-QSLWNNNKHFVYWCRYGSRQQDLRKRQV--TTSANH 314
Query: 193 MII 201
+++
Sbjct: 315 VLL 317
>AE014298-2011|AAF48353.2| 321|Drosophila melanogaster CG32597-PA
protein.
Length = 321
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +1
Query: 13 DKQETPNSEKDIRAKLDMATKSRFERNWHNTLHFVHWCRYGETPQEARMRQISLTTSKTP 192
DK++ P++EKDIR ++ +A K++ + W+N HFV+WCRYG Q+ R RQ+ TTS
Sbjct: 258 DKEKVPHNEKDIRNQVSVARKAK-QSLWNNNKHFVYWCRYGSRQQDLRKRQV--TTSANH 314
Query: 193 MII 201
+++
Sbjct: 315 VLL 317
>AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-PB,
isoform B protein.
Length = 4106
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 80 GSRGTGTIPCISSIGAVMERLHKRLACDRS 169
G GTG C+ ++GA++ RL CD +
Sbjct: 1618 GPAGTGKTECVKALGAMLGRLVLVFNCDEN 1647
>AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-PC,
isoform C protein.
Length = 4061
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 80 GSRGTGTIPCISSIGAVMERLHKRLACDRS 169
G GTG C+ ++GA++ RL CD +
Sbjct: 1618 GPAGTGKTECVKALGAMLGRLVLVFNCDEN 1647
>AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-PA,
isoform A protein.
Length = 4019
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 80 GSRGTGTIPCISSIGAVMERLHKRLACDRS 169
G GTG C+ ++GA++ RL CD +
Sbjct: 1618 GPAGTGKTECVKALGAMLGRLVLVFNCDEN 1647
>AE014298-3084|AAF50855.3| 447|Drosophila melanogaster CG33670-PA
protein.
Length = 447
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = -3
Query: 117 DEMQGIVPVPLEPGLSCHIQLSSDIFLAVGSLLLVVPSC 1
D +P SC I L++ +FL + ++ ++P+C
Sbjct: 315 DPHDSTAAIPYTVTKSCPIFLAAGVFLVISFIVFLIPTC 353
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,644,729
Number of Sequences: 53049
Number of extensions: 403417
Number of successful extensions: 1093
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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