BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0001_L18 (407 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY119552-1|AAM50206.1| 321|Drosophila melanogaster GH27568p pro... 62 2e-10 AE014298-2011|AAF48353.2| 321|Drosophila melanogaster CG32597-P... 62 2e-10 AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-P... 28 5.4 AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-P... 28 5.4 AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-P... 28 5.4 AE014298-3084|AAF50855.3| 447|Drosophila melanogaster CG33670-P... 27 7.2 >AY119552-1|AAM50206.1| 321|Drosophila melanogaster GH27568p protein. Length = 321 Score = 62.5 bits (145), Expect = 2e-10 Identities = 27/63 (42%), Positives = 44/63 (69%) Frame = +1 Query: 13 DKQETPNSEKDIRAKLDMATKSRFERNWHNTLHFVHWCRYGETPQEARMRQISLTTSKTP 192 DK++ P++EKDIR ++ +A K++ + W+N HFV+WCRYG Q+ R RQ+ TTS Sbjct: 258 DKEKVPHNEKDIRNQVSVARKAK-QSLWNNNKHFVYWCRYGSRQQDLRKRQV--TTSANH 314 Query: 193 MII 201 +++ Sbjct: 315 VLL 317 >AE014298-2011|AAF48353.2| 321|Drosophila melanogaster CG32597-PA protein. Length = 321 Score = 62.5 bits (145), Expect = 2e-10 Identities = 27/63 (42%), Positives = 44/63 (69%) Frame = +1 Query: 13 DKQETPNSEKDIRAKLDMATKSRFERNWHNTLHFVHWCRYGETPQEARMRQISLTTSKTP 192 DK++ P++EKDIR ++ +A K++ + W+N HFV+WCRYG Q+ R RQ+ TTS Sbjct: 258 DKEKVPHNEKDIRNQVSVARKAK-QSLWNNNKHFVYWCRYGSRQQDLRKRQV--TTSANH 314 Query: 193 MII 201 +++ Sbjct: 315 VLL 317 >AE014134-2890|ABI31323.1| 4106|Drosophila melanogaster CG15148-PB, isoform B protein. Length = 4106 Score = 27.9 bits (59), Expect = 5.4 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 80 GSRGTGTIPCISSIGAVMERLHKRLACDRS 169 G GTG C+ ++GA++ RL CD + Sbjct: 1618 GPAGTGKTECVKALGAMLGRLVLVFNCDEN 1647 >AE014134-2889|ABI31324.1| 4061|Drosophila melanogaster CG15148-PC, isoform C protein. Length = 4061 Score = 27.9 bits (59), Expect = 5.4 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 80 GSRGTGTIPCISSIGAVMERLHKRLACDRS 169 G GTG C+ ++GA++ RL CD + Sbjct: 1618 GPAGTGKTECVKALGAMLGRLVLVFNCDEN 1647 >AE014134-2888|AAF53638.2| 4019|Drosophila melanogaster CG15148-PA, isoform A protein. Length = 4019 Score = 27.9 bits (59), Expect = 5.4 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 80 GSRGTGTIPCISSIGAVMERLHKRLACDRS 169 G GTG C+ ++GA++ RL CD + Sbjct: 1618 GPAGTGKTECVKALGAMLGRLVLVFNCDEN 1647 >AE014298-3084|AAF50855.3| 447|Drosophila melanogaster CG33670-PA protein. Length = 447 Score = 27.5 bits (58), Expect = 7.2 Identities = 10/39 (25%), Positives = 20/39 (51%) Frame = -3 Query: 117 DEMQGIVPVPLEPGLSCHIQLSSDIFLAVGSLLLVVPSC 1 D +P SC I L++ +FL + ++ ++P+C Sbjct: 315 DPHDSTAAIPYTVTKSCPIFLAAGVFLVISFIVFLIPTC 353 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,644,729 Number of Sequences: 53049 Number of extensions: 403417 Number of successful extensions: 1093 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1033 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1086 length of database: 24,988,368 effective HSP length: 78 effective length of database: 20,850,546 effective search space used: 1188481122 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -