Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L18
(407 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28700.1 68416.m03581 expressed protein contains Pfam PF02636... 29 1.6
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 2.8
At1g25682.1 68414.m03178 cell cycle control protein-related cont... 28 2.8
At1g10110.1 68414.m01140 F-box family protein contains Pfam PF00... 27 3.7
At2g40280.1 68415.m04958 dehydration-responsive family protein s... 27 4.8
At5g49870.1 68418.m06175 jacalin lectin family protein similar t... 26 8.5
At3g29680.1 68416.m03741 transferase family protein similar to a... 26 8.5
At3g19250.1 68416.m02442 hypothetical protein 26 8.5
At1g37020.1 68414.m04616 Ulp1 protease family protein 26 8.5
>At3g28700.1 68416.m03581 expressed protein contains Pfam PF02636:
Uncharacterized ACR, COG1565
Length = 471
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 260 PVSESLKWGNIGMNMGVMLVSQNCTREKAKSV 355
P+++S G++G+N V + QNC E+A+S+
Sbjct: 392 PMTQSQFLGSLGINFRVDALLQNCNDEQAESL 423
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 153 SHATDQLNDVENTYDYHLLMVIVEALWTLTAGNNKY 260
S++T LND N++ ++ + E L T+T G +KY
Sbjct: 52 SNSTISLNDFSNSFFINIHIFTYEELKTITQGFSKY 87
>At1g25682.1 68414.m03178 cell cycle control protein-related
contains similarity to Swiss-Prot:Q9P7C5 cell cycle
control protein cwf16 [Schizosaccharomyces pombe]
Length = 310
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 28 PNSEKDIRAKLDMATKSRFERNWHNTLHFVH 120
P SE+DI+A ++ KS+F++N + +H
Sbjct: 217 PKSEEDIKAASNVKFKSKFDKNRKDKRALIH 247
>At1g10110.1 68414.m01140 F-box family protein contains Pfam
PF00646: F-box domain; similar to F-box protein family,
AtFBX7 (GI:20197899) [Arabidopsis thaliana]
Length = 332
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 153 SLLWSLSITAPMDEMQGIVPVPLEPGLSCHIQLSSDI 43
SL+W LS+T P +G+ + + CH LSS I
Sbjct: 252 SLVWDLSVTLP---TKGVSGIKKDSIYYCHTSLSSSI 285
>At2g40280.1 68415.m04958 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 589
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 23 RLPTARKISELSWIWQLSPGSRGTGTIPCISSIGAVMERLHKR 151
+L T+ ++ EL W L G+ IPC+ + A+ + +R
Sbjct: 68 KLNTSLEVGELKW--DLCKGAESVDYIPCLDNYAAIKQLKSRR 108
>At5g49870.1 68418.m06175 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 601
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 277 QMGQHWHEHGRNACQSKLHARKGQIGLSVASQRYV 381
++G W + A +K+H R GQ G+ YV
Sbjct: 159 KVGTKWDDGVNQAGFTKIHVRSGQKGIQFIKLEYV 193
>At3g29680.1 68416.m03741 transferase family protein similar to
anthocyanin 5-aromatic acyltransferase from Gentiana
triflora GI:4185599, malonyl CoA:anthocyanin
5-O-glucoside-6'''-O-malonyltransferase from Perilla
frutescens GI:17980232, Salvia splendens GI:17980234;
contains Pfam profile PF02458 transferase family
Length = 451
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 58 LDMATKSRFERNWHNTLHFVHWCRYGETPQE 150
+D T S+F ++W H C++G TPQ+
Sbjct: 164 MDGKTASKFHKSW------AHICKHGTTPQD 188
>At3g19250.1 68416.m02442 hypothetical protein
Length = 398
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 26 LPTARKISELSWIWQLSPGSRGTGTI-PCISSIGAVMERLHKRLACDR 166
LP + K ELS I+QL+ ++GT + + +I ++ RLH + D+
Sbjct: 287 LPHSFKKKELSNIFQLNVAAKGTFALNKDLDTIDRLVSRLHTGVKNDK 334
>At1g37020.1 68414.m04616 Ulp1 protease family protein
Length = 611
Score = 26.2 bits (55), Expect = 8.5
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 10 DDKQETPNSEKDIRAKLDMATKSR 81
D + ETPN E +++ K+ ATK +
Sbjct: 251 DKEDETPNKELELQLKIKDATKGK 274
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,410,360
Number of Sequences: 28952
Number of extensions: 187653
Number of successful extensions: 456
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 605614832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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