Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L15
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 62 3e-10
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase pro... 54 6e-08
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 50 8e-07
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 37 0.010
Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 34 0.072
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 33 0.13
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.50
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 31 0.50
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 31 0.50
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 30 0.88
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 30 1.2
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 30 1.2
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 2.0
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 2.0
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 2.7
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 3.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.6
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical ... 27 8.2
AF039650-1|AAC14022.3| 607|Caenorhabditis elegans acetylcholine... 27 8.2
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 27 8.2
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 61.7 bits (143), Expect = 3e-10
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +2
Query: 77 CYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HA 253
CY+ + + R+ +A+ +P D P L CTH+L+ + AD +L D A
Sbjct: 57 CYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEG 114
Query: 254 NYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFD 433
YR + LK QL+ L+ GG + + + S +R F +SA+ +GFD
Sbjct: 115 MYRRVNKLKVTDTQLKTLLSFGGW--SFGTALFQGMAASSASRKVFIDSAITFVRTWGFD 172
Query: 434 GIDLSWQ 454
GID+ W+
Sbjct: 173 GIDIDWE 179
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 57.6 bits (133), Expect = 5e-09
Identities = 36/148 (24%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Frame = +2
Query: 14 LAVALAATNHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQ 193
++ +AA+ +PA+P +++ YY + +Q ++ D +S TH ++ +
Sbjct: 68 ISSTVAASTYPATPGCNKRIIGYYFA------TQTSVITRD---QVSKLTHAVFAFVNMT 118
Query: 194 ADTYKMVSLNENLDIDRAHANYRAITNL-KRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 370
+D + + D D A + + + K+Q PQ++V +++GG+D++ + + +L S
Sbjct: 119 SDGHLQI------DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPVLSS 169
Query: 371 PQARTAFTNSALLLAEQYGFDGIDLSWQ 454
P + F NS + + Y DG+DL W+
Sbjct: 170 PDRKKLFINSTVSFLQTYDIDGVDLYWK 197
>AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase
protein.
Length = 117
Score = 54.0 bits (124), Expect = 6e-08
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +2
Query: 104 RESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HANYRAITNLK 280
R+ +A+ +P D P L CTH+L+ + AD +L D A YR + LK
Sbjct: 5 RQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLK 62
Query: 281 RQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 451
QL+ L+ GG + + + S +R F +SA +GFDGIDL W
Sbjct: 63 VTDTQLKTLLSFGGC--SFGTALFQGMAASSASRKVFIDSATTSVRTWGFDGIDLDW 117
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 50.4 bits (115), Expect = 8e-07
Identities = 34/143 (23%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +2
Query: 14 LAVALAATNHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQ 193
++ +AA+ +PA+P +++ YY + +Q ++ +D +S TH ++ I
Sbjct: 26 ISSTVAASTYPATPGCNKRIIGYYFA------TQTSVITSD---QVSNLTHAVFAFVNIT 76
Query: 194 ADTYKMVSLNENLDIDRAHANYRAITNL-KRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 370
+D + D D A + + + K+Q PQ++V +++GG+D++ + + +L S
Sbjct: 77 SDGQLQI------DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPVLSS 127
Query: 371 PQARTAFTNSALLLAEQYGFDGI 439
P + F NS + + Y DG+
Sbjct: 128 PDRKKLFINSTVSFLQTYDIDGV 150
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 50.4 bits (115), Expect = 8e-07
Identities = 23/59 (38%), Positives = 36/59 (61%)
Frame = +2
Query: 278 KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
K+Q P ++V +++GGDD++ + K +L SP R F N+ + YG DGIDL W+
Sbjct: 65 KQQTPPVKVMISIGGDDNSNNFYK---VLNSPNRRKVFLNATTSFLQIYGIDGIDLFWK 120
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +2
Query: 227 NLDIDRAHANYRAITNL----KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFT 394
+L ID A R TNL K+Q PQ++V +++GG+D++ + + L SP + F
Sbjct: 120 HLQIDGDLAKNR-FTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPGLSSPDRKKLFI 175
Query: 395 NSALLLAEQYGFDGIDLSWQ 454
NS + + Y DG+DL W+
Sbjct: 176 NSTVSFLQTYDIDGVDLYWK 195
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/75 (26%), Positives = 40/75 (53%)
Frame = +2
Query: 230 LDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALL 409
L+ D A A + + + P L++ VGG E+ Q +++L R+ ++ +
Sbjct: 72 LEGDAAKARLEHVKEVASRHPDLKLLYAVGG---WENSQYFSVLTADHSRRSILISNFVK 128
Query: 410 LAEQYGFDGIDLSWQ 454
+ ++YGFDG+D+ W+
Sbjct: 129 VIKEYGFDGVDIDWE 143
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 38.3 bits (85), Expect = 0.003
Identities = 15/55 (27%), Positives = 34/55 (61%)
Frame = +2
Query: 290 PQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
P+L++ +++GG ++++ + ++ SP + F NS + ++Y DG+DL W+
Sbjct: 142 PKLKMLISIGGPANSDN---FLPVISSPDRKKIFINSIVSFLKKYDIDGVDLFWK 193
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +2
Query: 296 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
+++ +++GG E+ Q ++ ++ES R F NS L ++ DGIDL W+
Sbjct: 134 VKIMISIGGK---ENSQNFSPVIESEYRRQIFINSILTFLKENDLDGIDLFWE 183
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/72 (23%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 239 DRAHANYRAITNLKRQFPQ-LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLA 415
+R+ + + N R+ L+V +++GG ++ + ++ L+ + +R F NS +
Sbjct: 152 ERSRRKFEEMKNEARKANSTLKVMISIGGQSNS---RSFSRLVSNETSRNVFVNSIVSFV 208
Query: 416 EQYGFDGIDLSW 451
++Y DGI++ W
Sbjct: 209 QKYDIDGIEIFW 220
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/61 (26%), Positives = 35/61 (57%)
Frame = +2
Query: 269 TNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLS 448
+N + L++ +++GG ++ + ++ L+ + +RT F NS + E+Y DGI++
Sbjct: 170 SNAREASSTLKIMISIGGHYNS---RSFSGLVFNETSRTVFVNSIVSFVEKYDIDGIEMF 226
Query: 449 W 451
W
Sbjct: 227 W 227
>Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical
protein C08H9.12 protein.
Length = 460
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 278 KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 451
+++ L+V +++GG + + ++ L+ +R FTNS + + Y DG+D+ W
Sbjct: 168 RKESSTLKVMISIGGQYSSGE---FSGLVSKETSRNLFTNSIVSFVQNYDIDGVDIFW 222
>Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical
protein T19H5.3 protein.
Length = 407
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/82 (20%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 212 VSLNENLDIDRAHANYRAITNLKR-QFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTA 388
+ + ++++D + + + + + + L++GG +T Q L++ P+ +
Sbjct: 111 IGFDGSVEVDHSSRTFSKLKEKSKIESSHFKKLLSIGGRSNT---QFLPLVIADPRRKRR 167
Query: 389 FTNSALLLAEQYGFDGIDLSWQ 454
F S + + E+Y DG+DL W+
Sbjct: 168 FFKSIISILEEYQLDGVDLLWK 189
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +2
Query: 272 NLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 451
N+++ L+V +++GG ++ + ++ L+ + +R F NS Y DG+D+ W
Sbjct: 166 NVRKASSTLKVMISIGGQYNSGE---FSGLVSNETSRNLFVNSIATFVRDYDIDGVDIFW 222
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 33.9 bits (74), Expect = 0.072
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = +2
Query: 299 RVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
++ ++GG +T Q ++ ++++ + + F +S + +QY DG+DL W+
Sbjct: 150 KIMFSIGGPANT---QFFSPIIQNEEMKRKFIDSIIYFLKQYKLDGVDLFWK 198
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +2
Query: 293 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLXXXXX 472
++++ ++GG D+++ ++ ++ S + F S L E Y DG+DL W+
Sbjct: 135 KIKLMFSIGGKDNSK---YFSSVIPSEERIQTFIESILEFLEAYDLDGVDLFWK-WPEEE 190
Query: 473 XXXXXXXFWHRIKKTF 520
F ++++KTF
Sbjct: 191 YRDAYFAFINQLRKTF 206
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +2
Query: 293 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLXXXXX 472
++++ ++GG D+++ ++ ++ S + F S L E Y DG+DL W+
Sbjct: 135 KIKLMFSIGGKDNSK---YFSSVIPSEERIQTFIESILEFLEAYDLDGVDLFWK-WPEEE 190
Query: 473 XXXXXXXFWHRIKKTF 520
F ++++KTF
Sbjct: 191 YRDAYFAFINQLRKTF 206
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +2
Query: 296 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
L++ ++GGD+++ D ++ L + Q ++ S + + DG+DL W+
Sbjct: 139 LKLMFSIGGDENSFD---FSSALANTQMKSTLITSIIAFIHSHMIDGVDLHWK 188
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 31.1 bits (67), Expect = 0.50
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +2
Query: 272 NLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 451
N K Q ++V ++GG + E Y+ ++ R+ F +S + + G+DL W
Sbjct: 156 NRKAQLMNVKVMFSIGGHKNAEH---YSTVVADSTKRSVFIDSIVSFIKSNNASGVDLFW 212
Query: 452 Q 454
+
Sbjct: 213 E 213
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 31.1 bits (67), Expect = 0.50
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 296 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
+RV VGG D++ Q ++ + R F +S E + DG+DL W+
Sbjct: 1030 VRVLFAVGGWDNS---QYFSSVAADSGKRRNFVDSVASFIEHHKIDGVDLDWE 1079
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.50
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +2
Query: 113 QARMLPTDLEPALSFCTHLLYKSAGIQADT----YKMVSLNENLDIDRAHANYRAITNLK 280
+ R+ P L+ ++ CTHL+Y S I DT Y + + DID N R L+
Sbjct: 37 KTRLSPNLLQN-ITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDID----NIRTFMRLR 91
Query: 281 RQFPQLRVFLTVGGDDDTED 340
+ P ++ + V ED
Sbjct: 92 KYHPNAKLLMGVVRTKPFED 111
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 30.3 bits (65), Expect = 0.88
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 296 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
+RV VGG D++ Q ++ + R F +S E DG+DL W+
Sbjct: 1567 VRVLFAVGGWDNS---QYFSSVAADSGKRKKFVDSIASFVEDQKIDGVDLDWE 1616
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 155 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDT 334
F +L K GI A YK+VSLN L++ + A N R+ +F + DDD
Sbjct: 511 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDDA 567
Query: 335 E 337
E
Sbjct: 568 E 568
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 155 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDT 334
F +L K GI A YK+VSLN L++ + A N R+ +F + DDD
Sbjct: 507 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDDA 563
Query: 335 E 337
E
Sbjct: 564 E 564
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 200 CQLGCRQICTADGCRTKEQAPSP 132
CQ C+Q C C T+ AP+P
Sbjct: 103 CQSSCQQTCQTSSCYTQIAAPAP 125
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 200 CQLGCRQICTADGCRTKEQAPSP 132
CQ C+Q C C T+ AP+P
Sbjct: 104 CQSSCQQTCQTSSCYTQIAAPAP 126
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 441 SIPSKPYCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPPT 313
S P+K S +RAE ++VR G SN + SS + PT
Sbjct: 675 STPTKTRASPPKRAESNQSVRTSGSSNSVVQHSASSSTDYVPT 717
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 221 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 370
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1780 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1829
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 221 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 370
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1853 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1902
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 221 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 370
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1853 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1902
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +2
Query: 296 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
++ +++GG D + + + ++ + R F S + L ++ DG+DL W+
Sbjct: 11 VKKMISIGGCDYSTN---FTSVVSNQTIRRVFIESIIALLIEHNLDGVDLFWR 60
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +2
Query: 296 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 454
+++ +++GGD E+ Q ++ +L F S + DG+D+ W+
Sbjct: 155 VKIMISIGGD---ENSQYFSSVLSDITMCKLFIESIIAFIHTNSIDGMDIHWK 204
>AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical
protein Y48B6A.8 protein.
Length = 607
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 222 LSETILYVSAWMPADLYS 169
+SE LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133
>AF039650-1|AAC14022.3| 607|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 607
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 222 LSETILYVSAWMPADLYS 169
+SE LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 176 CTADGCRTKEQAPSP*AAYVLEIL*YSSCCHSSRGLCFGY 57
C+ + C AP +Y YSSCC+S+ C GY
Sbjct: 65 CSCNPCNGGGCAPR--CSYCPNNFGYSSCCNSNNFSCCGY 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,072,087
Number of Sequences: 27780
Number of extensions: 213324
Number of successful extensions: 702
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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