Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L14
         (406 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7AAE6 Cluster: Putative uncharacterized protein; n=1; ...    33   2.2  
UniRef50_A0YIV3 Cluster: Putative uncharacterized protein; n=1; ...    32   5.0  
UniRef50_A5Z4N8 Cluster: Putative uncharacterized protein; n=1; ...    31   6.6  
UniRef50_Q8IBF9 Cluster: Putative uncharacterized protein PF07_0...    31   6.6  
UniRef50_Q11RA4 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  

>UniRef50_A7AAE6 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides merdae ATCC 43184|Rep: Putative
           uncharacterized protein - Parabacteroides merdae ATCC
           43184
          Length = 208

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +2

Query: 236 IFMCYKVGIDIYKIY*YTLYVI*QALFYIELTLYKHVFFSNYYITYHRQL 385
           IF+ Y +   IYK+Y Y      + LF + L  ++  +FSN Y  ++R+L
Sbjct: 156 IFLFYLLFPLIYKLYRYIKTYNPRLLFLLPLVSHRFCYFSNRYFLHYRRL 205


>UniRef50_A0YIV3 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 308

 Score = 31.9 bits (69), Expect = 5.0
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 66  YERNTLYNI*KKCFVNYNPYENST*YPRSTINNSNSKHLKQQ*HY 200
           YE   + NI KK F+NYNP  N T +       ++ ++LK   HY
Sbjct: 176 YESKKIINILKKLFINYNPL-NKTPFNFEDPPKNSEQNLKDFTHY 219


>UniRef50_A5Z4N8 Cluster: Putative uncharacterized protein; n=1;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 138

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +3

Query: 213 LFCKIHTLYLCVIKSV*TFIKYTNILY-TLYNRHYFI*NLRFISMFFFQIIILHIIGNSL 389
           +FC I+ ++  V+  +  F  +TN  Y  ++  H FI    ++  + F I   +   N++
Sbjct: 18  VFCLIYNIFNFVLCHLNVF--FTNFFYKNVFGIHCFIFGFVYLIHYLFDIFFTNFFSNNV 75

Query: 390 FNI 398
           FN+
Sbjct: 76  FNL 78


>UniRef50_Q8IBF9 Cluster: Putative uncharacterized protein
           PF07_0125; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PF07_0125 - Plasmodium
           falciparum (isolate 3D7)
          Length = 868

 Score = 31.5 bits (68), Expect = 6.6
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
 Frame = +3

Query: 165 SNSKHLKQQ*HY-RLYI--LFC-KIHTLYLCVIKSV*TFIKYTNILYTLYNRHYFI*NLR 332
           + SK LK Q +Y  +Y     C  IH + L V+ S+   + Y N+  + Y R Y++ N+R
Sbjct: 557 TQSKELKNQHNYITIYDNETNCFNIHNVVLPVLGSMSPRLSYLNVFLSFY-RKYYMKNVR 615

Query: 333 --FISMFFFQIIILH 371
             F+ + F+ I IL+
Sbjct: 616 LVFMEILFYLIYILY 630


>UniRef50_Q11RA4 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 214

 Score = 31.1 bits (67), Expect = 8.7
 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +3

Query: 204 LYILFCKIHTLYLCVIKSV*TFIKYTNILYTLYNRHYFI*NLRFISMFFFQIII-LHIIG 380
           +Y+LF  I+ L+L ++  V  +  YTN  YT         N+  I +F  +III + +I 
Sbjct: 90  VYLLFASIYMLFLSMVNGVPVYSIYTNQFYT---------NIPLIILFPLEIIIGIQLIS 140

Query: 381 NS 386
           N+
Sbjct: 141 NT 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 294,397,143
Number of Sequences: 1657284
Number of extensions: 5088228
Number of successful extensions: 9673
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9667
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17773009086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)