Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L14
         (406 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   0.86 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   3.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   6.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   8.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   8.0  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 0.86
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 234 KYGFYKIIYRVYNVIVVS 181
           ++ FYKI    YN++ VS
Sbjct: 36  RHSFYKIYKYTYNIVAVS 53


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 14/60 (23%), Positives = 28/60 (46%)
 Frame = +3

Query: 198 YRLYILFCKIHTLYLCVIKSV*TFIKYTNILYTLYNRHYFI*NLRFISMFFFQIIILHII 377
           + +++LF  +  + LC+      FI +T  L  L   +YF   +  +    F I  +H++
Sbjct: 222 FTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFY-YMHLLFCCAFIIFTMHLL 280



 Score = 20.6 bits (41), Expect = 6.1
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
 Frame = +3

Query: 198 YRLYILFCKIHTLY-----LCVIKSV*TFIKYTNILYTLYNRHYFI*NLRFISMFFF 353
           + ++ L C  +  Y     LCV      FI +T  L  L   +YF+  L F+   ++
Sbjct: 92  FTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYY 148


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 250 ITHKYKVWILQNNI 209
           I HK+K+W   N I
Sbjct: 413 IRHKFKLWNFNNQI 426


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 5/21 (23%), Positives = 14/21 (66%)
 Frame = +1

Query: 343  CFFFKLLYYIS*ATLYLIFTV 405
            C  + ++YY++  ++YL+  +
Sbjct: 1001 CLKYGVIYYVTVPSMYLLLVI 1021


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 5/21 (23%), Positives = 14/21 (66%)
 Frame = +1

Query: 343  CFFFKLLYYIS*ATLYLIFTV 405
            C  + ++YY++  ++YL+  +
Sbjct: 1001 CLKYGVIYYVTVPSMYLLLVI 1021


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 327 LRFISMFFFQIIILHIIGNSLFNIY 401
           L+FI  +    I  ++ GN+L+ ++
Sbjct: 84  LKFIRKYGSHFIESYVTGNALYQVF 108


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 323 ELTLYKHVFFSNYYITYHRQ 382
           +L   KH F  N Y+T  R+
Sbjct: 239 QLARLKHEFAENRYLTERRR 258


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 90  YCIVYYVRMLIYL 52
           Y I+Y+ R+++YL
Sbjct: 330 YNILYFCRIMVYL 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,899
Number of Sequences: 336
Number of extensions: 1853
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8752267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)