Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L13
(515 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07024-1|CAA30073.1| 1554|Homo sapiens CCG1 protein protein. 72 1e-12
D90359-1|BAA14374.1| 1872|Homo sapiens CCG1 protein protein. 72 1e-12
AY623109-1|AAT38105.1| 1893|Homo sapiens TAF1 RNA polymerase II,... 72 1e-12
AB209316-1|BAD92553.1| 1070|Homo sapiens TBP-associated factor 1... 72 1e-12
AF390562-1|AAN40840.1| 1826|Homo sapiens TBP-associated factor R... 68 2e-11
BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting corepr... 37 0.048
BC038987-1|AAH38987.1| 289|Homo sapiens Similar to RIKEN cDNA 1... 37 0.048
BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein. 37 0.048
BC021175-1|AAH21175.1| 227|Homo sapiens CIR protein protein. 37 0.048
AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting corepr... 37 0.048
AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein. 37 0.048
BC015040-1|AAH15040.1| 202|Homo sapiens CIR protein protein. 30 5.5
U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein. 29 7.3
L04270-1|AAA36757.1| 435|Homo sapiens tumor necrosis factor rec... 29 7.3
CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein. 29 7.3
BC150270-1|AAI50271.1| 1781|Homo sapiens MYST4 protein protein. 29 7.3
BC048199-1|AAH48199.1| 325|Homo sapiens MYST4 protein protein. 29 7.3
BC026262-1|AAH26262.1| 435|Homo sapiens lymphotoxin beta recept... 29 7.3
BC014143-1|AAH14143.1| 325|Homo sapiens MYST4 protein protein. 29 7.3
BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5 pr... 29 7.3
AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransfera... 29 7.3
AF119230-1|AAF00099.1| 1890|Homo sapiens histone acetyltransfera... 29 7.3
AF113514-1|AAF00095.1| 1781|Homo sapiens histone acetyltransfera... 29 7.3
AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein. 29 7.3
AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein. 29 7.3
AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein. 29 7.3
AB002381-1|BAA20837.2| 1781|Homo sapiens KIAA0383 protein. 29 7.3
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 29 9.7
BC063586-1|AAH63586.1| 298|Homo sapiens golgi phosphoprotein 3 ... 29 9.7
BC033725-1|AAH33725.1| 298|Homo sapiens golgi phosphoprotein 3 ... 29 9.7
BC012123-1|AAH12123.1| 298|Homo sapiens golgi phosphoprotein 3 ... 29 9.7
AK075156-1|BAC11438.1| 298|Homo sapiens protein ( Homo sapiens ... 29 9.7
AJ296152-1|CAC13124.1| 298|Homo sapiens Golgi protein protein. 29 9.7
AF010607-1|AAB92396.1| 465|Homo sapiens SMAD5 protein. 29 9.7
>X07024-1|CAA30073.1| 1554|Homo sapiens CCG1 protein protein.
Length = 1554
Score = 71.7 bits (168), Expect = 1e-12
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Frame = +2
Query: 200 RRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPL------DTDAEPPSIEP 361
++ K +PDLKLKCGACG +GHMRTNK CPLY + A PS+P+ + + E I
Sbjct: 1196 KKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNA-PPSNPVAMTEEQEEELEKTVIHN 1254
Query: 362 EDDDLGYVDGTKLTLPSKIIK 424
++++L V+GTK+ L ++I+
Sbjct: 1255 DNEELIKVEGTKIVLGKQLIE 1275
Score = 32.7 bits (71), Expect = 0.78
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 5 REQLRRIKRNQERERLAG 58
+EQLRR+KRNQE+E+L G
Sbjct: 1172 QEQLRRLKRNQEKEKLKG 1189
>D90359-1|BAA14374.1| 1872|Homo sapiens CCG1 protein protein.
Length = 1872
Score = 71.7 bits (168), Expect = 1e-12
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Frame = +2
Query: 200 RRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPL------DTDAEPPSIEP 361
++ K +PDLKLKCGACG +GHMRTNK CPLY + A PS+P+ + + E I
Sbjct: 1252 KKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNA-PPSNPVAMTEEQEEELEKTVIHN 1310
Query: 362 EDDDLGYVDGTKLTLPSKIIK 424
++++L V+GTK+ L ++I+
Sbjct: 1311 DNEELIKVEGTKIVLGKQLIE 1331
Score = 32.7 bits (71), Expect = 0.78
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 5 REQLRRIKRNQERERLAG 58
+EQLRR+KRNQE+E+L G
Sbjct: 1228 QEQLRRLKRNQEKEKLKG 1245
>AY623109-1|AAT38105.1| 1893|Homo sapiens TAF1 RNA polymerase II, TATA
box binding protein (TBP)-associated factor, 250kD
protein.
Length = 1893
Score = 71.7 bits (168), Expect = 1e-12
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Frame = +2
Query: 200 RRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPL------DTDAEPPSIEP 361
++ K +PDLKLKCGACG +GHMRTNK CPLY + A PS+P+ + + E I
Sbjct: 1273 KKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNA-PPSNPVAMTEEQEEELEKTVIHN 1331
Query: 362 EDDDLGYVDGTKLTLPSKIIK 424
++++L V+GTK+ L ++I+
Sbjct: 1332 DNEELIKVEGTKIVLGKQLIE 1352
Score = 32.7 bits (71), Expect = 0.78
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 5 REQLRRIKRNQERERLAG 58
+EQLRR+KRNQE+E+L G
Sbjct: 1249 QEQLRRLKRNQEKEKLKG 1266
>AB209316-1|BAD92553.1| 1070|Homo sapiens TBP-associated factor 1
isoform 2 variant protein.
Length = 1070
Score = 71.7 bits (168), Expect = 1e-12
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 6/81 (7%)
Frame = +2
Query: 200 RRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPL------DTDAEPPSIEP 361
++ K +PDLKLKCGACG +GHMRTNK CPLY + A PS+P+ + + E I
Sbjct: 416 KKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNA-PPSNPVAMTEEQEEELEKTVIHN 474
Query: 362 EDDDLGYVDGTKLTLPSKIIK 424
++++L V+GTK+ L ++I+
Sbjct: 475 DNEELIKVEGTKIVLGKQLIE 495
Score = 32.7 bits (71), Expect = 0.78
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 5 REQLRRIKRNQERERLAG 58
+EQLRR+KRNQE+E+L G
Sbjct: 392 QEQLRRLKRNQEKEKLKG 409
>AF390562-1|AAN40840.1| 1826|Homo sapiens TBP-associated factor RNA
polymerase 1-like protein.
Length = 1826
Score = 68.1 bits (159), Expect = 2e-11
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Frame = +2
Query: 200 RRAKLKPDLKLKCGACGQVGHMRTNKACPLYTGSMAGGPSSPL------DTDAEPPSIEP 361
++ K +PDLKLKCGACG +GHMRTNK CPLY + PS P+ + + E I
Sbjct: 1271 KKMKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNV-PPSKPVAMTEEQEEELEKTVIHN 1329
Query: 362 EDDDLGYVDGTKLTLPSKIIK 424
++++L V+GTK+ ++I+
Sbjct: 1330 DNEELIKVEGTKIVFGKQLIE 1350
Score = 32.7 bits (71), Expect = 0.78
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 5 REQLRRIKRNQERERLAG 58
+EQLRR+KRNQE+E+L G
Sbjct: 1247 QEQLRRLKRNQEKEKLKG 1264
>BC046098-1|AAH46098.1| 450|Homo sapiens CBF1 interacting
corepressor protein.
Length = 450
Score = 36.7 bits (81), Expect = 0.048
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPPSIEPED 367
++C C + GH+ T++ CPL+ ++G +S + TD PS+ P +
Sbjct: 126 VRCIKCHKWGHVNTDRECPLF--GLSGINASSVPTDGSGPSMHPSE 169
>BC038987-1|AAH38987.1| 289|Homo sapiens Similar to RIKEN cDNA
1700023B02 gene protein.
Length = 289
Score = 36.7 bits (81), Expect = 0.048
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPPSIEPED 367
++C C + GH+ T++ CPL+ ++G +S + TD PS+ P +
Sbjct: 126 VRCIKCHKWGHVNTDRECPLF--GLSGINASSVPTDGSGPSMHPSE 169
>BC031018-1|AAH31018.1| 426|Homo sapiens CIR protein protein.
Length = 426
Score = 36.7 bits (81), Expect = 0.048
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPPSIEPED 367
++C C + GH+ T++ CPL+ ++G +S + TD PS+ P +
Sbjct: 126 VRCIKCHKWGHVNTDRECPLF--GLSGINASSVPTDGSGPSMHPSE 169
>BC021175-1|AAH21175.1| 227|Homo sapiens CIR protein protein.
Length = 227
Score = 36.7 bits (81), Expect = 0.048
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPPSIEPED 367
++C C + GH+ T++ CPL+ ++G +S + TD PS+ P +
Sbjct: 126 VRCIKCHKWGHVNTDRECPLF--GLSGINASSVPTDGSGPSMHPSE 169
>AF098297-1|AAD05243.1| 450|Homo sapiens CBF1 interacting
corepressor CIR protein.
Length = 450
Score = 36.7 bits (81), Expect = 0.048
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPPSIEPED 367
++C C + GH+ T++ CPL+ ++G +S + TD PS+ P +
Sbjct: 126 VRCIKCHKWGHVNTDRECPLF--GLSGINASSVPTDGSGPSMHPSE 169
>AC018470-1|AAY24216.1| 450|Homo sapiens unknown protein.
Length = 450
Score = 36.7 bits (81), Expect = 0.048
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPPSIEPED 367
++C C + GH+ T++ CPL+ ++G +S + TD PS+ P +
Sbjct: 126 VRCIKCHKWGHVNTDRECPLF--GLSGINASSVPTDGSGPSMHPSE 169
>BC015040-1|AAH15040.1| 202|Homo sapiens CIR protein protein.
Length = 202
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 230 LKCGACGQVGHMRTNKACPLYTGSMAGGPSSPLD 331
++C C + GH+ T++ CPL+ S S P D
Sbjct: 126 VRCIKCHKWGHVNTDRECPLFGLSGINASSVPTD 159
>U73825-1|AAB95090.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 29.5 bits (63), Expect = 7.3
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 278 ACPLYTGSMAG-GPSSP--LDTDAEPPSIEPEDDDLGYVDGTKLTLPSKIIKQ 427
A Y S A GP SP L D PP+ P DD +G + + + +I Q
Sbjct: 198 ASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDTSNNMIPQ 250
>L04270-1|AAA36757.1| 435|Homo sapiens tumor necrosis factor
receptor 2 related protein protein.
Length = 435
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 287 LYTGSMAGGPSSPLDTDA--EPPSIEPEDDDLG 379
+Y G + GGP P D A EPP PE+ D G
Sbjct: 363 IYNGPVLGGPPGPGDLPATPEPPYPIPEEGDPG 395
>CR457424-1|CAG33705.1| 465|Homo sapiens MADH5 protein.
Length = 465
Score = 29.5 bits (63), Expect = 7.3
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 278 ACPLYTGSMAG-GPSSP--LDTDAEPPSIEPEDDDLGYVDGTKLTLPSKIIKQ 427
A Y S A GP SP L D PP+ P DD +G + + + +I Q
Sbjct: 198 ASSAYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDTSNNMIPQ 250
>BC150270-1|AAI50271.1| 1781|Homo sapiens MYST4 protein protein.
Length = 1781
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 182 LHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYT 295
L T R K KP+ L C CG GH K CP T
Sbjct: 220 LGTKESNREK-KPEELLSCADCGSSGHPSCLKFCPELT 256
>BC048199-1|AAH48199.1| 325|Homo sapiens MYST4 protein protein.
Length = 325
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 182 LHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYT 295
L T R K KP+ L C CG GH K CP T
Sbjct: 220 LGTKESNREK-KPEELLSCADCGSSGHPSCLKFCPELT 256
>BC026262-1|AAH26262.1| 435|Homo sapiens lymphotoxin beta receptor
(TNFR superfamily, member 3) protein.
Length = 435
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +2
Query: 287 LYTGSMAGGPSSPLDTDA--EPPSIEPEDDDLG 379
+Y G + GGP P D A EPP PE+ D G
Sbjct: 363 IYNGPVLGGPPGPGDLPATPEPPYPIPEEGDPG 395
>BC014143-1|AAH14143.1| 325|Homo sapiens MYST4 protein protein.
Length = 325
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 182 LHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYT 295
L T R K KP+ L C CG GH K CP T
Sbjct: 220 LGTKESNREK-KPEELLSCADCGSSGHPSCLKFCPELT 256
>BC009682-1|AAH09682.1| 465|Homo sapiens SMAD family member 5
protein.
Length = 465
Score = 29.5 bits (63), Expect = 7.3
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 278 ACPLYTGSMAG-GPSSP--LDTDAEPPSIEPEDDDLGYVDGTKLTLPSKIIKQ 427
A Y S A GP SP L D PP+ P DD +G + + + +I Q
Sbjct: 198 ASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDTSNNMIPQ 250
>AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransferase
MORF beta protein.
Length = 2073
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 182 LHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYT 295
L T R K KP+ L C CG GH K CP T
Sbjct: 220 LGTKESNREK-KPEELLSCADCGSSGHPSCLKFCPELT 256
>AF119230-1|AAF00099.1| 1890|Homo sapiens histone acetyltransferase
MORF alpha protein.
Length = 1890
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 182 LHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYT 295
L T R K KP+ L C CG GH K CP T
Sbjct: 220 LGTKESNREK-KPEELLSCADCGSSGHPSCLKFCPELT 256
>AF113514-1|AAF00095.1| 1781|Homo sapiens histone acetyltransferase
MORF protein.
Length = 1781
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 182 LHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYT 295
L T R K KP+ L C CG GH K CP T
Sbjct: 220 LGTKESNREK-KPEELLSCADCGSSGHPSCLKFCPELT 256
>AF010601-1|AAB66353.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 29.5 bits (63), Expect = 7.3
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 278 ACPLYTGSMAG-GPSSP--LDTDAEPPSIEPEDDDLGYVDGTKLTLPSKIIKQ 427
A Y S A GP SP L D PP+ P DD +G + + + +I Q
Sbjct: 198 ASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDTSNNMIPQ 250
>AF009744-1|AAB82655.1| 462|Homo sapiens Mad homolog protein.
Length = 462
Score = 29.5 bits (63), Expect = 7.3
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 278 ACPLYTGSMAG-GPSSP--LDTDAEPPSIEPEDDDLGYVDGTKLTLPSKIIKQ 427
A Y S A GP SP L D PP+ P DD +G + + + +I Q
Sbjct: 195 ASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDTSNNMIPQ 247
>AF009678-1|AAB72180.1| 465|Homo sapiens Smad5 protein.
Length = 465
Score = 29.5 bits (63), Expect = 7.3
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 278 ACPLYTGSMAG-GPSSP--LDTDAEPPSIEPEDDDLGYVDGTKLTLPSKIIKQ 427
A Y S A GP SP L D PP+ P DD +G + + + +I Q
Sbjct: 198 ASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDTSNNMIPQ 250
>AB002381-1|BAA20837.2| 1781|Homo sapiens KIAA0383 protein.
Length = 1781
Score = 29.5 bits (63), Expect = 7.3
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 182 LHTTSRRRAKLKPDLKLKCGACGQVGHMRTNKACPLYT 295
L T R K KP+ L C CG GH K CP T
Sbjct: 220 LGTKESNREK-KPEELLSCADCGSSGHPSCLKFCPELT 256
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 29.1 bits (62), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 233 KCGACGQVGHMRTNKACPLYTGSMAGGPSSPLDTDAEPPSIEP 361
KC CGQ+GH++ N CP+ + T EPP + P
Sbjct: 544 KCYNCGQIGHLKKN--CPVLNKQNI-TIQATTTTGREPPDLCP 583
>BC063586-1|AAH63586.1| 298|Homo sapiens golgi phosphoprotein 3
(coat-protein) protein.
Length = 298
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 305 AGGPSSPLDTDAEPPSIEPEDDDLGYVDGTKLTLPSKII 421
AGG + + DA+ E +DDD G T+LTL +++
Sbjct: 29 AGGGAGSSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVL 67
>BC033725-1|AAH33725.1| 298|Homo sapiens golgi phosphoprotein 3
(coat-protein) protein.
Length = 298
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 305 AGGPSSPLDTDAEPPSIEPEDDDLGYVDGTKLTLPSKII 421
AGG + + DA+ E +DDD G T+LTL +++
Sbjct: 29 AGGGAGSSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVL 67
>BC012123-1|AAH12123.1| 298|Homo sapiens golgi phosphoprotein 3
(coat-protein) protein.
Length = 298
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 305 AGGPSSPLDTDAEPPSIEPEDDDLGYVDGTKLTLPSKII 421
AGG + + DA+ E +DDD G T+LTL +++
Sbjct: 29 AGGGAGSSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVL 67
>AK075156-1|BAC11438.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ90675 fis, clone PLACE1005669. ).
Length = 298
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 305 AGGPSSPLDTDAEPPSIEPEDDDLGYVDGTKLTLPSKII 421
AGG + + DA+ E +DDD G T+LTL +++
Sbjct: 29 AGGGAGSSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVL 67
>AJ296152-1|CAC13124.1| 298|Homo sapiens Golgi protein protein.
Length = 298
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 305 AGGPSSPLDTDAEPPSIEPEDDDLGYVDGTKLTLPSKII 421
AGG + + DA+ E +DDD G T+LTL +++
Sbjct: 29 AGGGAGSSEDDAQSRRDEQDDDDKGDSKETRLTLMEEVL 67
>AF010607-1|AAB92396.1| 465|Homo sapiens SMAD5 protein.
Length = 465
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 305 AGGPSSP--LDTDAEPPSIEPEDDDLGYVDGTKLTLPSKIIKQ 427
+ GP SP L D PP+ P DD +G + + + +I Q
Sbjct: 208 SSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDTSNNMIPQ 250
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,301,079
Number of Sequences: 237096
Number of extensions: 1158383
Number of successful extensions: 3186
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3182
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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