Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L12
         (408 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   3.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   7.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   7.5  
AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450 CY...    22   9.9  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 13  NQNLTTLSLMTPSQM 57
           N N+T LS M+PS+M
Sbjct: 286 NDNMTDLSRMSPSEM 300


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 102 HQLYHEPHGDYH 67
           HQL H PH  +H
Sbjct: 101 HQLPHHPHHQHH 112


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.2 bits (45), Expect = 7.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 102 HQLYHEPHGDYH 67
           HQL H PH  +H
Sbjct: 101 HQLPHHPHHQHH 112


>AF487536-1|AAL93297.1|  504|Anopheles gambiae cytochrome P450
           CYP6Y1 protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 9.9
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +3

Query: 75  LRVVRDTVDDKHKEATVK 128
           +RVV+DTV+ + +E  V+
Sbjct: 249 MRVVKDTVEYREREQIVR 266


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,176
Number of Sequences: 2352
Number of extensions: 1498
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)