BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L12
(408 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p pro... 30 1.0
AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,... 30 1.0
AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,... 30 1.0
BT015990-1|AAV36875.1| 1449|Drosophila melanogaster RE54461p pro... 28 4.1
AY051455-1|AAK92879.1| 1126|Drosophila melanogaster GH12050p pro... 28 4.1
AE014134-732|AAN10345.1| 1126|Drosophila melanogaster CG3054-PB,... 28 4.1
AE014134-731|AAF51018.3| 1449|Drosophila melanogaster CG3054-PA,... 28 4.1
>BT010019-1|AAQ22488.1| 1506|Drosophila melanogaster RE10624p
protein.
Length = 1506
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 102 HQLYHEPHGDYHH*NHLTWSHQ 37
HQL+H H +HH +H W Q
Sbjct: 54 HQLHHHHHQQHHHNHHRLWKTQ 75
>AE014298-952|AAF46200.2| 1571|Drosophila melanogaster CG3126-PA,
isoform A protein.
Length = 1571
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 102 HQLYHEPHGDYHH*NHLTWSHQ 37
HQL+H H +HH +H W Q
Sbjct: 54 HQLHHHHHQQHHHNHHRLWKTQ 75
>AE014298-951|AAO41635.1| 1520|Drosophila melanogaster CG3126-PB,
isoform B protein.
Length = 1520
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 102 HQLYHEPHGDYHH*NHLTWSHQ 37
HQL+H H +HH +H W Q
Sbjct: 54 HQLHHHHHQQHHHNHHRLWKTQ 75
>BT015990-1|AAV36875.1| 1449|Drosophila melanogaster RE54461p protein.
Length = 1449
Score = 28.3 bits (60), Expect = 4.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 143 FLFWCFDCSFFVFVINCITNH 81
F+ WC+ C F V V++ + ++
Sbjct: 1273 FVMWCYGCKFIVLVVSLLVSY 1293
>AY051455-1|AAK92879.1| 1126|Drosophila melanogaster GH12050p protein.
Length = 1126
Score = 28.3 bits (60), Expect = 4.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 143 FLFWCFDCSFFVFVINCITNH 81
F+ WC+ C F V V++ + ++
Sbjct: 950 FVMWCYGCKFIVLVVSLLVSY 970
>AE014134-732|AAN10345.1| 1126|Drosophila melanogaster CG3054-PB,
isoform B protein.
Length = 1126
Score = 28.3 bits (60), Expect = 4.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 143 FLFWCFDCSFFVFVINCITNH 81
F+ WC+ C F V V++ + ++
Sbjct: 950 FVMWCYGCKFIVLVVSLLVSY 970
>AE014134-731|AAF51018.3| 1449|Drosophila melanogaster CG3054-PA,
isoform A protein.
Length = 1449
Score = 28.3 bits (60), Expect = 4.1
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 143 FLFWCFDCSFFVFVINCITNH 81
F+ WC+ C F V V++ + ++
Sbjct: 1273 FVMWCYGCKFIVLVVSLLVSY 1293
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,167,709
Number of Sequences: 53049
Number of extensions: 67573
Number of successful extensions: 328
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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