Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L11
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   1.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   4.4  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   5.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   5.8  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -1

Query: 438 TLMRLPTISAGNTRSSNMASYTEVSVLERGLFC-LLATRVLWLGLGRILRS 289
           TL     + A N          +++VLE G FC +   R L +G+ R +++
Sbjct: 527 TLSNTSLLGAANQLEELNLKNIDLTVLESGAFCKMQPLRTLKIGVYRNIKN 577


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 363 VLERGLFCLLATRVLWLGLGRILRSPTNTTCFTAELLF 250
           +L  GLFC+L T         +L   T T    AE +F
Sbjct: 1   MLTWGLFCVLVTLATARNKAPLLDDGTRTRNKAAECVF 38


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 18  YENPQSGCYRTRHLRDFDLAG 80
           Y+NP+S   + ++ +  +LAG
Sbjct: 337 YDNPKSIAIKVQYAKSLNLAG 357


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 18  YENPQSGCYRTRHLRDFDLAG 80
           ++NP+S   + ++ +D +LAG
Sbjct: 325 FDNPKSVALKAQYAKDNNLAG 345


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 18  YENPQSGCYRTRHLRDFDLAG 80
           Y+N QS   +T + ++ +LAG
Sbjct: 326 YDNEQSVTIKTEYAKEKNLAG 346


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +2

Query: 182 SFMCRCP 202
           +FMCRCP
Sbjct: 165 TFMCRCP 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,276
Number of Sequences: 336
Number of extensions: 2673
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)