Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L11
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AC024214-8|AAF36070.2| 296|Caenorhabditis elegans Hypothetical ... 29 1.7
Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z48582-3|CAA88464.1| 401|Caenorhabditis elegans Hypothetical pr... 27 5.2
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 27 5.2
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 27 5.2
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 27 5.2
AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical ... 27 5.2
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 27 5.2
Z82265-7|CAB05171.2| 425|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 6.9
AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical ... 27 9.1
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z75714-1|CAB00058.1| 194|Caenorhabditis elegans Hypothetical
protein ZC434.2 protein.
Length = 194
Score = 101 bits (241), Expect = 3e-22
Identities = 48/83 (57%), Positives = 62/83 (74%)
Frame = +1
Query: 22 KILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 201
K+LK+ E +SQAL++LETN D+++QL+ELYI KE+EL NK +IIIYVP+P
Sbjct: 7 KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66
Query: 202 KLKAFQKIQIRLVRELEKKFSGK 270
+LKAF KI LVRELEKKF G+
Sbjct: 67 QLKAFHKIHPALVRELEKKFGGR 89
Score = 86.2 bits (204), Expect = 1e-17
Identities = 39/69 (56%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +2
Query: 269 KHVVFVGDRKILPKPSHKTRVA-NKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKL 445
+ ++ + R+ILPKP ++ KQKRPRSRTLT+V+DA L++LV+PAE+VG+RIRVKL
Sbjct: 89 RDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVHDAWLDELVYPAEVVGRRIRVKL 148
Query: 446 DGSQLIKVH 472
DG ++ KVH
Sbjct: 149 DGKKVYKVH 157
>AC024214-8|AAF36070.2| 296|Caenorhabditis elegans Hypothetical
protein Y77E11A.9 protein.
Length = 296
Score = 29.1 bits (62), Expect = 1.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -2
Query: 407 GIPDLPIWRHIQKSVSWNGAFSVCWLHVSCGWAW 306
GIP+ + S++W+G + C+ +C AW
Sbjct: 5 GIPNTTNNTQVNTSLTWDGCLTACFYSPACVMAW 38
>Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical
protein C06B3.2 protein.
Length = 665
Score = 28.7 bits (61), Expect = 2.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 350 AFSVCWLHVSCGWAWAGSYGH 288
A SV W+ +SC + WAG G+
Sbjct: 572 ALSVLWIILSCHYGWAGPIGN 592
>Z48582-3|CAA88464.1| 401|Caenorhabditis elegans Hypothetical
protein F27E5.1 protein.
Length = 401
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 49 PDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIY--VPMPKLKAFQK 222
PD ++ + S+ ++ + N DL + R I KA + E+H ++ Y +P + A++
Sbjct: 39 PDIYDPAQSEKVLWFDVNLDLPPRQRFQQIAKAYKKEIHAVFDVLNYFLTIIPGVNAWEL 98
Query: 223 IQIRLVRELEK 255
I L+K
Sbjct: 99 IGNMTASALDK 109
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 27.5 bits (58), Expect = 5.2
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 413 RPGIPDLPIWRHIQKSVSWNGAFSVCWLHVSC 318
RP I D P+W ++ +++++ S+C +C
Sbjct: 746 RPSIHDCPVWIELKINIAYDFMDSICQYITNC 777
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 27.5 bits (58), Expect = 5.2
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 413 RPGIPDLPIWRHIQKSVSWNGAFSVCWLHVSC 318
RP I D P+W ++ +++++ S+C +C
Sbjct: 842 RPSIHDCPVWIELKINIAYDFMDSICQYITNC 873
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 27.5 bits (58), Expect = 5.2
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 413 RPGIPDLPIWRHIQKSVSWNGAFSVCWLHVSC 318
RP I D P+W ++ +++++ S+C +C
Sbjct: 814 RPSIHDCPVWIELKINIAYDFMDSICQYITNC 845
>AL032655-1|CAA21726.1| 995|Caenorhabditis elegans Hypothetical
protein Y6B3B.3 protein.
Length = 995
Score = 27.5 bits (58), Expect = 5.2
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 215 SKRSKSGLSVS*KRSSAVKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYD--AI 388
SK+ ++ + K+SSA K G KI+ KT A K+K+ + + +V + +
Sbjct: 864 SKKKENSKIENPKKSSASKESTNTGRSKIITTTDPKTGKATKEKKKQKKGDKTVQEKFVV 923
Query: 389 LEDLVFPAEIVGKRIRVKLDGSQL 460
+ +L + K LDG+QL
Sbjct: 924 VNELTVDPTMETK----TLDGTQL 943
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 27.5 bits (58), Expect = 5.2
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = -2
Query: 413 RPGIPDLPIWRHIQKSVSWNGAFSVCWLHVSC 318
RP I D P+W ++ +++++ S+C +C
Sbjct: 746 RPSIHDCPVWIELKINIAYDFMDSICQYITNC 777
>Z82265-7|CAB05171.2| 425|Caenorhabditis elegans Hypothetical
protein F02H6.4 protein.
Length = 425
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +1
Query: 169 KKSIIIYVPMPKLKAFQKIQIR---LVRELEKKFSGKACCVRW 288
+ + I YV + K F + + L+RE EKKF K RW
Sbjct: 357 RTTCIFYVILKNNKLFCNLLVESVVLLRECEKKFEAKLYLFRW 399
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 28 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 207
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 208 KAFQKIQIRLV 240
+ QK ++LV
Sbjct: 2262 EKTQKYDLKLV 2272
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical protein
F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 28 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 207
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 208 KAFQKIQIRLV 240
+ QK ++LV
Sbjct: 2262 EKTQKYDLKLV 2272
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 28 LKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKL 207
LK A P++ TSI Q L+ ++ + + E ++ +K+IE+H + +
Sbjct: 2204 LKYTASTPES--TSIGQRLLTIKATTSDENDTIEYSLSGSKDIEIHPETGDVTITGQLDY 2261
Query: 208 KAFQKIQIRLV 240
+ QK ++LV
Sbjct: 2262 EKTQKYDLKLV 2272
>AF098506-1|ABN43085.1| 145|Caenorhabditis elegans Hypothetical
protein H29C22.1 protein.
Length = 145
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 73 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 192
S+A ++LE N D+ E + K + E +NK+ + Y+
Sbjct: 33 SRAAIKLENNDDVPELFHENFEFKTCKEERYNKEQTVDYI 72
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 320 KTRVANKQKRPRSRTLTSVYDAILEDLVFPAE 415
K ++ K K RSR+L++V A ++L FP E
Sbjct: 599 KPQLGKKMKVGRSRSLSAVRPAPRDELAFPDE 630
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,547,930
Number of Sequences: 27780
Number of extensions: 248969
Number of successful extensions: 648
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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