Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L11
         (474 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    27   0.077
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   1.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.2  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   5.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   8.9  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   8.9  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   8.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.9  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.9  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 27.5 bits (58), Expect = 0.077
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +1

Query: 52  DTFETSISQALVELETNSDLKAQLRE 129
           +T  T++S AL EL  N D++ +LRE
Sbjct: 307 ETSSTTMSNALYELALNQDVQKKLRE 332


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +1

Query: 43  IEPDTFETSISQALVELETNSDLKAQLRELYITKAKE 153
           + P+TF   ++   V++  N     +L  L +TK  E
Sbjct: 632 VRPNTFTDKVNLTRVDMYANMIETMELTSLLLTKVAE 668


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 296 YGHQRTQHALPLN 258
           YGHQ++ H L +N
Sbjct: 804 YGHQQSHHGLHIN 816


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -2

Query: 260 NFFSNSRTSLIWIFWNAFS 204
           + F+   T  +W+FW +F+
Sbjct: 210 DIFAMIGTIFLWLFWPSFN 228


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 206 SLGIGT*MIMDFLL*SSISLALVMYSSRS 120
           ++ I T + + F+  + +  ALV Y+SRS
Sbjct: 303 AIDIWTGVCLTFVFGALLEFALVNYASRS 331


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 206 SLGIGT*MIMDFLL*SSISLALVMYSSRS 120
           ++ I T + + F+  + +  ALV Y+SRS
Sbjct: 303 AIDIWTGVCLTFVFGALLEFALVNYASRS 331


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/21 (28%), Positives = 10/21 (47%)
 Frame = -2

Query: 386 WRHIQKSVSWNGAFSVCWLHV 324
           WRH    + W   F V + ++
Sbjct: 401 WRHFAAIIEWLSFFIVIFTYI 421


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 365 VSWNGAFSVCWLHVSC 318
           + WN AF++    +SC
Sbjct: 509 IRWNSAFAIAPAVISC 524


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 353 GAFSVCWLHVSCGWAWAG 300
           G F +CWL       W+G
Sbjct: 342 GVFIICWLPFFVVNLWSG 359


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 365 VSWNGAFSVCWLHVSC 318
           + WN AF++    +SC
Sbjct: 599 IRWNSAFAIAPAVISC 614


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,360
Number of Sequences: 438
Number of extensions: 3190
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)