Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L10
(581 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 253 2e-66
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 248 6e-65
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 222 6e-57
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 163 3e-39
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 160 3e-38
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 155 9e-37
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 138 7e-32
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 116 4e-25
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 111 2e-23
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 104 2e-21
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 101 1e-20
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 100 2e-20
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 100 5e-20
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 99 7e-20
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 97 4e-19
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 96 6e-19
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 91 2e-17
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 89 5e-17
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 85 9e-16
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 77 4e-13
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 75 9e-13
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 74 2e-12
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 72 1e-11
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 70 3e-11
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 68 1e-10
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 66 8e-10
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 65 1e-09
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 63 5e-09
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 7e-09
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 61 2e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 60 4e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 60 4e-08
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 57 3e-07
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 57 3e-07
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 57 3e-07
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 55 1e-06
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 54 3e-06
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 54 3e-06
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 51 2e-05
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 50 4e-05
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 50 5e-05
UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1; S... 48 1e-04
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 2e-04
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 47 4e-04
UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;... 46 5e-04
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 46 7e-04
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 45 0.002
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 44 0.002
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 44 0.003
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 42 0.008
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 41 0.019
UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.... 40 0.032
UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.075
UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protei... 34 2.8
UniRef50_Q3BXL0 Cluster: TonB-dependent outer membrane receptor ... 33 3.7
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 33 4.9
UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole... 33 6.5
UniRef50_UPI00005874CE Cluster: PREDICTED: similar to OTTHUMP000... 32 8.6
UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6; ... 32 8.6
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 253 bits (620), Expect = 2e-66
Identities = 119/149 (79%), Positives = 131/149 (87%)
Frame = +3
Query: 60 MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISR 506
V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
+GTIEI++DV ++K GDKVGASEATL
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATL 174
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 248 bits (608), Expect = 6e-65
Identities = 117/149 (78%), Positives = 130/149 (87%)
Frame = +3
Query: 60 MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALE+LLPHI+GNVGFVFT+ DL +VRD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISR 506
V +PA NTGLGPEKTSFFQAL I TKISR
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISR 149
Score = 47.6 bits (108), Expect = 2e-04
Identities = 20/26 (76%), Positives = 25/26 (96%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
+GTIEI++DV ++KPGDKVGASEATL
Sbjct: 149 RGTIEILSDVQLIKPGDKVGASEATL 174
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 222 bits (542), Expect = 6e-57
Identities = 100/149 (67%), Positives = 123/149 (82%)
Frame = +3
Query: 60 MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
MGRED A WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
+RKA++ HLE NP LEK+LPH+KGN+GFVFT D+VD+R+ +L N+V APA+ GAIAP+
Sbjct: 61 IRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVD 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISR 506
V +PA NTGLGPEKTSFFQALSI TKISR
Sbjct: 121 VFVPASNTGLGPEKTSFFQALSIATKISR 149
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/26 (69%), Positives = 25/26 (96%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
+GTIEI+++VH++K G+KVGASEATL
Sbjct: 149 RGTIEILSEVHLIKIGEKVGASEATL 174
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 163 bits (396), Expect = 3e-39
Identities = 78/149 (52%), Positives = 105/149 (70%)
Frame = +3
Query: 60 MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
+ +E K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
+RKAIK+ ET P LE+LLPHIKGNVGF+FT+GDL ++ KL E K +PA+ G IAP
Sbjct: 68 IRKAIKNQAETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPND 127
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISR 506
V++PA +TGL P +T+F QAL+I +KI++
Sbjct: 128 VIVPAGDTGLDPTQTNFVQALNIASKITK 156
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 160 bits (388), Expect = 3e-38
Identities = 78/151 (51%), Positives = 107/151 (70%), Gaps = 2/151 (1%)
Frame = +3
Query: 60 MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M + A K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 240 MRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAP 413
M+++++ H E N A+ LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP
Sbjct: 61 MKRSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAP 120
Query: 414 LSVVIPAHNTGLGPEKTSFFQALSIPTKISR 506
+ VV+ NTGL P +TSFFQ L+IPTKI++
Sbjct: 121 IDVVVQPGNTGLDPSQTSFFQVLNIPTKINK 151
Score = 39.5 bits (88), Expect = 0.057
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
KGT+EII V ++K GDKVG+SEA L
Sbjct: 151 KGTVEIITPVELIKQGDKVGSSEAAL 176
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 155 bits (375), Expect = 9e-37
Identities = 74/139 (53%), Positives = 102/139 (73%), Gaps = 2/139 (1%)
Frame = +3
Query: 96 YFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET- 272
Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM+++++ H +
Sbjct: 14 YDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSVRIHADKT 73
Query: 273 -NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 449
N A LLP ++GNVG +FT+GDL +V +++ + KV APAR G +AP+ VV+ NTGL
Sbjct: 74 GNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGL 133
Query: 450 GPEKTSFFQALSIPTKISR 506
P +TSFFQ L+IPTKI++
Sbjct: 134 DPSQTSFFQVLNIPTKINK 152
Score = 39.5 bits (88), Expect = 0.057
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
KGT+EII V ++K GDKVG+SEA L
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSEAAL 177
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 138 bits (335), Expect = 7e-32
Identities = 69/139 (49%), Positives = 93/139 (66%), Gaps = 1/139 (0%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT +R A+K +L
Sbjct: 10 KQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIRTALKKNL 69
Query: 267 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQA-PARPGAIAPLSVVIPAHNT 443
+ P +EKLLP +K N+GFVF + DL ++R+ +L+NK + PAR G IAP+ V IP T
Sbjct: 70 QAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPT 129
Query: 444 GLGPEKTSFFQALSIPTKI 500
G+ P TSF ++L I TKI
Sbjct: 130 GMDPSHTSFLESLGISTKI 148
Score = 34.3 bits (75), Expect = 2.1
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
KG IEI VH++K G+KV AS ATL
Sbjct: 150 KGQIEIQEHVHLIKQGEKVTASSATL 175
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 116 bits (279), Expect = 4e-25
Identities = 59/140 (42%), Positives = 85/140 (60%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 267 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 446
++ P L+ L ++K N +F + ++ +V+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 447 LGPEKTSFFQALSIPTKISR 506
+ P +TSF Q L I TKI+R
Sbjct: 129 MEPTQTSFLQDLKIATKINR 148
Score = 43.2 bits (97), Expect = 0.005
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
+G I+I+N+VHI+K G KVGASEATL
Sbjct: 148 RGQIDIVNEVHIIKTGQKVGASEATL 173
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 111 bits (266), Expect = 2e-23
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 18/167 (10%)
Frame = +3
Query: 60 MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIR-ISLRGHSIVLMGKNT 236
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q IR I + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 237 MMRKAIKDHLETNPA-----------------LEKLLPHIKGNVGFVFTRGDLVDVRDKL 365
+ +K + ++ P L+ L + G VGF+FT + D++ +
Sbjct: 61 LFKKVLATRVQELPKEHEYYEDLAKFGSAIKELDALKNSVAGKVGFIFTDTPVFDLKPII 120
Query: 366 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 506
ENKV+ PAR GA+AP+ VVIP TG+ P FF AL IPTKI +
Sbjct: 121 EENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEK 167
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 104 bits (249), Expect = 2e-21
Identities = 57/167 (34%), Positives = 100/167 (59%), Gaps = 18/167 (10%)
Frame = +3
Query: 60 MGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNT 236
M +D K+ +F ++ + D+Y + +V DN+ ++Q+ R LR + S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 237 MMRKAIKDHL------ETN-----------PALEKLLPHIKGNVGFVFTRGDLVDVRDKL 365
+++ A++ + E++ P +E L+ +KGN+G +FT DL D++D +
Sbjct: 61 LIKAALQKRISKPIESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDII 120
Query: 366 LENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 506
+ +APAR G++A V I A TGL P++T+FFQ L+IPTKI++
Sbjct: 121 DRHTREAPARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAK 167
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 101 bits (242), Expect = 1e-20
Identities = 58/137 (42%), Positives = 83/137 (60%)
Frame = +3
Query: 96 YFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETN 275
Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I + L+ +
Sbjct: 16 YVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI-NQLDDD 74
Query: 276 PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 455
L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI T GP
Sbjct: 75 K-LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGP 133
Query: 456 EKTSFFQALSIPTKISR 506
++ F+ AL I TKI++
Sbjct: 134 DQHGFYAALGIDTKINK 150
Score = 32.7 bits (71), Expect = 6.5
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
KG IEI+N V+++K GD V S ATL
Sbjct: 150 KGKIEIVNPVNLIKKGDIVTPSHATL 175
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 100 bits (240), Expect = 2e-20
Identities = 61/155 (39%), Positives = 89/155 (57%), Gaps = 17/155 (10%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
Query: 267 -ETN----------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPAR 395
E N P LE L+P ++GNV +F ++ +V + E+KV A A+
Sbjct: 63 TEPNAEDEDFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAK 122
Query: 396 PGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKI 500
G IAP V + TG+ P +TSFFQAL I TKI
Sbjct: 123 AGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKI 157
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 99.5 bits (237), Expect = 5e-20
Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 267 ETNPA--LEKLLPH-------IKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
E A +KLL + + GN +FT ++ + L +++VQAPAR GAIAP
Sbjct: 68 EDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCD 127
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISR 506
V++PA NTG+ P+ TSFFQAL+I TKI++
Sbjct: 128 VIVPAGNTGMEPKATSFFQALNIATKIAK 156
Score = 32.7 bits (71), Expect = 6.5
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
KGT+EI++D +L GD+V S ATL
Sbjct: 156 KGTVEIVSDKKVLSVGDRVDNSTATL 181
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 99.1 bits (236), Expect = 7e-20
Identities = 61/136 (44%), Positives = 70/136 (51%)
Frame = -2
Query: 505 LEILVGMERAWKKEVFSGPRPVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVK 326
L ILVG +AWKKEV G PVL A +GA AP AGA TL S VK
Sbjct: 4 LAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGSLVK 63
Query: 325 TKPTFPLM*GSSFSRAGFVSRWSLMAFLIMVFLPMSTML*PRNEXXXXXXXCEPTLSAPT 146
TKPT PL G++FS++G + LMA L MVFLP+ T P N E TLS PT
Sbjct: 64 TKPTLPLTKGNNFSKSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPT 123
Query: 145 MKHFGYSSNSWMILTK 98
YSS + L K
Sbjct: 124 TNKDLYSSKYSLNLAK 139
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 96.7 bits (230), Expect = 4e-19
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Frame = +3
Query: 78 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAI 254
A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT+MR A+
Sbjct: 18 AEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMRIAL 77
Query: 255 KDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPA 434
++ L+ P LE LL +I+G V F+FT D + L E+K APA+PG IAP +V+P
Sbjct: 78 EEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPE 137
Query: 435 HNTGLGPEK-TSFFQALSIPTKI 500
T P S Q +P +I
Sbjct: 138 GPTPFEPGPIVSELQQAGLPAQI 160
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 95.9 bits (228), Expect = 6e-19
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Frame = +3
Query: 72 DNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKA 251
D K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 252 IK---DHLETN-------------PALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQ 383
++ L T+ P L L+PH+K + +VF + ++ K+ V
Sbjct: 67 VQLKSADLPTDSKYDWYRQFGAPKPQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVP 126
Query: 384 APARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 506
APAR G +A V+IP TG+ P + +FF ALSI TKI +
Sbjct: 127 APARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQK 167
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 91.1 bits (216), Expect = 2e-17
Identities = 54/154 (35%), Positives = 89/154 (57%)
Frame = +3
Query: 45 FTQSKMGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLM 224
F M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LM
Sbjct: 20 FFHPGMTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLM 79
Query: 225 GKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGA 404
GKN+ +R+AI D P L + +KG+V FVF +G+ D++ + EN +A A+ G
Sbjct: 80 GKNSAIRRAIADL--GKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGN 137
Query: 405 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 506
+A V + + TG+ P+KTS+FQAL I TKI++
Sbjct: 138 VAQRDVWVESCITGMTPDKTSYFQALGIATKITK 171
Score = 32.3 bits (70), Expect = 8.6
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKVGASEATL 580
KG +EII+ +L GDKVG S+A L
Sbjct: 171 KGKVEIISPYKVLSEGDKVGPSQANL 196
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 89.4 bits (212), Expect = 5e-17
Identities = 44/138 (31%), Positives = 78/138 (56%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
KS F K L ++ + +V +N+ S+Q+++ + L SI++ GKNT+++K ++D L
Sbjct: 9 KSLVFKKFNFLFSKFSRLIVVKIENLNSEQIKKCKRLLNNTSILITGKNTLIKKVLRDRL 68
Query: 267 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 446
+ + ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 69 KNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTN 128
Query: 447 LGPEKTSFFQALSIPTKI 500
+ P+ FQ+L+IPTKI
Sbjct: 129 ISPDGIGIFQSLNIPTKI 146
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 85.4 bits (202), Expect = 9e-16
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSI-VLMGKNTMMRKAIKDH 263
K +Y K+ L +Y K +V + NV + Q+ IR L H VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 264 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 443
E P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T
Sbjct: 71 KEELPGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRT 130
Query: 444 GLGPEKTSFFQALSIPTKI 500
+ P AL+I KI
Sbjct: 131 SMSPNDIKILHALNIQCKI 149
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +2
Query: 500 FKGTIEIINDVHILKPGDKVGASEATL 580
FKGTIEI + ++ G KVGASEA +
Sbjct: 150 FKGTIEITGEKQLIWEGQKVGASEANI 176
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 76.6 bits (180), Expect = 4e-13
Identities = 37/129 (28%), Positives = 68/129 (52%)
Frame = +3
Query: 69 EDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 248
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 249 AIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 428
A++ E L+ L +++G VG V T + + +L +K AP G +AP +V+
Sbjct: 70 ALE---EAGDGLDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVV 126
Query: 429 PAHNTGLGP 455
P +TG+ P
Sbjct: 127 PEGDTGIDP 135
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 75.4 bits (177), Expect = 9e-13
Identities = 40/134 (29%), Positives = 71/134 (52%)
Frame = +3
Query: 105 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 284
K I LL+ Y IV +N+ S+Q+ IR LRG S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNNKLEMSRW 70
Query: 285 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKT 464
+ ++ N+G +FT +L + + + + + G IA +++I L P +T
Sbjct: 71 MSVKEYLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQT 130
Query: 465 SFFQALSIPTKISR 506
FFQAL IPT+IS+
Sbjct: 131 PFFQALGIPTRISK 144
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 74.1 bits (174), Expect = 2e-12
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Frame = +3
Query: 78 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVL-MGKNTMMRKAI 254
A WK ++ +L+ YP +V ++ + + Q+R +R + +L + +NT++ AI
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 255 KDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 428
K + P LEKL+ +I G + T + + L +N+ APA+PGA+ P VV+
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 429 PAHNTGLGPEK-TSFFQALSIPTKISR 506
PA T L P QAL IP +I +
Sbjct: 125 PAGPTPLAPGPIVGQMQALGIPARIEK 151
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 71.7 bits (168), Expect = 1e-11
Identities = 44/127 (34%), Positives = 61/127 (48%)
Frame = -1
Query: 500 NLSGDGKSLEERSLLRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDK 321
NL + +SLEERSL V N D W N + + + V I + GED+
Sbjct: 180 NLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDE 239
Query: 320 ANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHNAVTTQ*NTDLLHLLRAYIVRTHYE 141
N++LD R+Q F W D HGV H+ N+ +Q +D +HLL +IV T+ E
Sbjct: 240 TNVTLDERQQLFVVWEVRDETSDSSSDHGVLTHQDNSSASQVLSDFVHLLGRHIVNTNNE 299
Query: 140 TFWVFVQ 120
VF Q
Sbjct: 300 DRLVFFQ 306
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 70.1 bits (164), Expect = 3e-11
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +3
Query: 243 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 380
++AI+ HLE N L KLLPHIK VGFVFT+GDLV+VRDKL+E+KV
Sbjct: 692 QQAIRVHLEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 35.9 bits (79), Expect = 0.70
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +2
Query: 503 KGTIEIINDVHILKPGDKV 559
KGTIEIINDV ILK GDK+
Sbjct: 747 KGTIEIINDVPILKSGDKI 765
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 68.1 bits (159), Expect = 1e-10
Identities = 40/142 (28%), Positives = 72/142 (50%), Gaps = 3/142 (2%)
Frame = +3
Query: 84 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 263
WK ++ +L+ ++ I + + + Q R LRGH +V + +N + A++
Sbjct: 21 WKVKVLKELEELIKKHSVIMIFDLRELPASMLHQYRRVLRGHGVVKVFRNKLFLIALRRI 80
Query: 264 L--ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 437
N +EK ++ G GF+FT + D+ +++N V+ A+PG + +++PA
Sbjct: 81 YGDSVNAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAG 137
Query: 438 NTGLGPEKT-SFFQALSIPTKI 500
NTG+ P S F L IPT+I
Sbjct: 138 NTGINPGPVLSRFSKLKIPTQI 159
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 65.7 bits (153), Expect = 8e-10
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 1/130 (0%)
Frame = +3
Query: 114 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKL 293
+LL +YP F+ + S+ + + R LR + ++ + K T+ + A PA ++
Sbjct: 29 ELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPA--EI 86
Query: 294 LPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSF 470
++G VGF FT + +V + EN V+ A+PG AP +V+PA T P S
Sbjct: 87 AEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISK 146
Query: 471 FQALSIPTKI 500
F L IPT++
Sbjct: 147 FGKLKIPTRV 156
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Frame = +3
Query: 78 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 257
A WK ++ L + + IV ++ ++Q+Q +R SL ++I+ M + ++ A++
Sbjct: 5 ADWKKEKVAELEDLTNSHEIIGIVNLADIPAKQLQTMRKSLGDNAILKMSRKNFIKIALE 64
Query: 258 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 437
+ +E L +++G VFT+ + + L ++K +APA+ G+IAP +V+PA
Sbjct: 65 N--SDKEEVEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAG 122
Query: 438 NTGLGPEK-TSFFQALSIPTKISR 506
+T P Q + IP KI +
Sbjct: 123 DTSFPPGPILGELQQVGIPAKIDK 146
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 62.9 bits (146), Expect = 5e-09
Identities = 43/142 (30%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
K+ + ++ +L +Y I+ + V S Q+ +R +L+ K+ + +KA+++
Sbjct: 12 KTQMYQQLQELPKKYKVMAIIKMNKVRSTQILPLRKTLKDDVEFFSVKDKVAQKALEN-- 69
Query: 267 ETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 446
P ++ ++ KG V +FT + L +NK+ AR G IA + VV+PA NTG
Sbjct: 70 SDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTG 129
Query: 447 L--GPEKTSFFQALSIPTKISR 506
+ GP T F +A IPTKI +
Sbjct: 130 IAPGPMLTEFKEA-GIPTKIDQ 150
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 62.5 bits (145), Expect = 7e-09
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Frame = +3
Query: 78 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 257
A WK + +LL ++ V + Q+Q+IR +R + M +NT++++A++
Sbjct: 11 APWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVE 70
Query: 258 DHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 431
+ E NP KL+ ++ V T + + L E+K AP + GAIAP + +
Sbjct: 71 EVAEETGNPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVK 130
Query: 432 AHNTGLGPEK-TSFFQALSIPTKISR 506
+ +TG+ P S +A+ IP I +
Sbjct: 131 SGSTGMPPGPFLSELKAVGIPAAIDK 156
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Frame = +3
Query: 84 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 263
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARSF--- 67
Query: 264 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 443
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T
Sbjct: 68 --GGSGMNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPT 125
Query: 444 GLGP-EKTSFFQALSIPTKI 500
L P Q L IP+ I
Sbjct: 126 SLRPGPVVGELQNLGIPSGI 145
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.1 bits (139), Expect = 4e-08
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +3
Query: 210 SIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP 389
S+ M K+++ +A K NP L+P + GNVG +FT+GDL + +++ + KV AP
Sbjct: 38 SVFAMVKHSIRLRAEKTG---NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAP 94
Query: 390 ARPGAIAPLSVVIPAHNTGL 449
A G +A + V++P NTGL
Sbjct: 95 AHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +3
Query: 165 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRG 338
G + + R +V + K + + + H E NP L+P + GNVG + T+G
Sbjct: 574 GGHSFYFLGLVFRVSFLVWLPKRLFSQHSSRLHAEKTGNPVFLNLVPLLVGNVGLISTKG 633
Query: 339 DLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 449
DL +V ++ + KV APAR G ++ + V++P NTGL
Sbjct: 634 DLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +3
Query: 273 NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 449
NP L+P + GNVG +FT+GDL +V +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 60.1 bits (139), Expect = 4e-08
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 1/140 (0%)
Frame = +3
Query: 84 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 263
WK + +I + ++E+ +V + + Q+QQIR +LRG + V M +NT++ A+
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALN-- 68
Query: 264 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 443
E ++ L H +G +FT + + L + K + A+PG AP +VIP T
Sbjct: 69 -ELGGSVATLNDHAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPT 127
Query: 444 GLGPEK-TSFFQALSIPTKI 500
P Q + IP I
Sbjct: 128 SFKPGPIVGELQQVGIPAAI 147
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 57.2 bits (132), Expect = 3e-07
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Frame = +3
Query: 144 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 323
+V +++ + Q+ +R LR K+ + RKA+ P ++K++ + G F
Sbjct: 17 LVRMESIRASQILPLRKKLRDSVSFFSIKDKVARKALAK--TDVPGMDKMMDQLTGQCMF 74
Query: 324 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTK 497
+FT + L +NK AR G IA + V +PA NTG+ GP T F +A IPTK
Sbjct: 75 MFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTK 133
Query: 498 ISR 506
I +
Sbjct: 134 IDQ 136
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 56.8 bits (131), Expect = 3e-07
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
K +I + D Y +++ + N+ S QQ+R S++G++ + MGKN +MR A+
Sbjct: 33 KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRTSMKGYARIFMGKNQLMRYALGKTE 92
Query: 267 ETNPALE--KLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 431
E + + +L +KG G +FT VR L AR G +A ++VIP
Sbjct: 93 EESYRTKTWQLGRLLKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP 149
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 56.8 bits (131), Expect = 3e-07
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
Frame = +3
Query: 78 ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIK 257
A+WK ++ +L+ I + + ++ +IR LRG + + + KNT+ + A K
Sbjct: 14 ASWKLEEVKELTELIKNSNTILIGNLEGFPADKLHEIRKKLRGKATIKVTKNTLFKIAAK 73
Query: 258 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLEN-KVQAPARPGAIAPLSVVIPA 434
+ +EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA
Sbjct: 74 N---AGIDIEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPA 129
Query: 435 HNTGL--GPEKTSFFQALSIPTKI 500
+TG+ GP S F L + TK+
Sbjct: 130 GDTGMPAGP-ILSVFGKLKVQTKV 152
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Frame = +3
Query: 75 NATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI 254
N K F I + + Y CF+ DN+ + ++ +R L I GK + +A+
Sbjct: 19 NREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKELNDCRI-FFGKTKLTARAL 77
Query: 255 KDHLETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVI 428
E A L+KL ++ G+VG +FT D +++D + AR G++A ++ I
Sbjct: 78 GTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQVDFARAGSVATRTITI 137
Query: 429 PA 434
P+
Sbjct: 138 PS 139
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 53.6 bits (123), Expect = 3e-06
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Frame = +3
Query: 84 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 263
WK + L YP I + Q+Q++R L + + KN ++ +A+++
Sbjct: 15 WKIEEVEYLTTLFKSYPVFAIADLTGFPTNQLQKLRKKLSKKVLFRVSKNKLILRALRNA 74
Query: 264 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 443
E+LL G +FT + ++ L + K + +PG IA +VIP NT
Sbjct: 75 GIDTSKFEELLT---GQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNT 131
Query: 444 GLGPEK-TSFFQALSIPTKI 500
GL P S F L IPT+I
Sbjct: 132 GLSPGPILSTFSKLKIPTRI 151
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 53.6 bits (123), Expect = 3e-06
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 2/140 (1%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMMRKAIKDH 263
K+ ++ L +Y + + + ++ R LR S++ + KNT+ A+K+
Sbjct: 17 KAKLLEELSGYLKQYRYYMVASITGLPASVVKTSRSLLRSDGSLMKVVKNTIFLLALKN- 75
Query: 264 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 443
T +E + H++G +FT + ++ L + K+ AR G IA +V+PA NT
Sbjct: 76 --TGKYVEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNT 133
Query: 444 GLGP-EKTSFFQALSIPTKI 500
G+ P S F L IPT++
Sbjct: 134 GIPPGPMISNFNKLGIPTRV 153
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 51.2 bits (117), Expect = 2e-05
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Frame = +3
Query: 84 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--K 257
WK I + +YP F+ N+ + ++ +R L+ +S + GKN +M+ +
Sbjct: 22 WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGRT 81
Query: 258 DHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAH 437
E P L KL + G VG +FT +V + AR G +A +V +PA
Sbjct: 82 KSEEVEPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLPAG 141
Query: 438 N-TGLGPEKTSFFQALSIPTKISR 506
++L +PTK+ +
Sbjct: 142 PLEDFAHSMEPHLRSLGLPTKLEK 165
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 50.0 bits (114), Expect = 4e-05
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Frame = +3
Query: 69 EDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRK 248
+ +A K K+ Q LDEY + ++V N +Q++ +IR ++ + L G N +
Sbjct: 11 QKHAPKKKQDVAKVRQYLDEYKRVYVVTLHNPRTQKVSEIRKNMPDIKL-LFGINKVTVW 69
Query: 249 AI-KDHLET-NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 422
A+ K H ++ P L L ++KG +FT+ ++R++L + RPGA A +V
Sbjct: 70 ALGKTHKDSYRPKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTV 129
Query: 423 VIPAHNTGLGPEKTS-FFQALSIPTKISR 506
I + P + L +P K+ R
Sbjct: 130 RIASGPLPKFPHTMEPVLRQLGMPVKLVR 158
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 49.6 bits (113), Expect = 5e-05
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Frame = +3
Query: 84 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 263
WK + KI+ + + IV V + +Q++R +L G + M +NT+ A D
Sbjct: 16 WKKDEIKKIVDGVHSHKVVGIVDVRGVPADSLQKMRRNLLGKVEMRMVRNTLSTIAF-DS 74
Query: 264 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 443
L ++L ++ G + V+T + + L K + A+ G IAP +VIP T
Sbjct: 75 LPEGEKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPT 134
Query: 444 GLGP-EKTSFFQALSIPTKI 500
P FQ + IP I
Sbjct: 135 SFKPGPLVGEFQQVGIPAGI 154
>UniRef50_Q9USZ6 Cluster: mRNA turnover protein 4 homolog; n=1;
Schizosaccharomyces pombe|Rep: mRNA turnover protein 4
homolog - Schizosaccharomyces pombe (Fission yeast)
Length = 241
Score = 48.4 bits (110), Expect = 1e-04
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
K+ F + Q LD + +I N+ + +++IR +G S + MGK +M KA+
Sbjct: 23 KAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKALGHTP 81
Query: 267 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAP-ARPGAIAPLSVVIPA 434
E A + KL + G VG +FT +V E+ VQ AR GA+AP + VIPA
Sbjct: 82 EEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIG-YFESFVQNDFARAGAVAPFTHVIPA 139
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 48.0 bits (109), Expect = 2e-04
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +3
Query: 84 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 263
WK + I +L+ + +V + + + ++Q+IR L+ +++ + +NT+ +A+
Sbjct: 14 WKKDEIENIKELIQSHKVFGMVRIEGILATKIQKIRRDLKDVAVLKVSRNTLTERALNQL 73
Query: 264 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 443
E+ P + + L + +FT + L + K +P + GAIAP +++ T
Sbjct: 74 GESIPEMTRYLDN---QTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPT 130
Query: 444 GLGPEK-TSFFQALSIPTKI 500
P Q+ IP I
Sbjct: 131 SFPPGPILGELQSAGIPASI 150
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 46.8 bits (106), Expect = 4e-04
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Frame = +3
Query: 84 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDH 263
WK ++++ + + G + + + Q++R LR S V + N + R+AI
Sbjct: 14 WKLREVDELVERIRSSRVVGVAGIRELPADEFQRLRGLLRPISEVRVVNNNIARRAI--- 70
Query: 264 LETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 443
L+++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 444 GLGP-EKTSFFQALSIPTKI 500
P Q+ IP I
Sbjct: 131 SFSPGPMVGKLQSAGIPAAI 150
>UniRef50_Q4Q0U9 Cluster: 60S acidic ribosomal protein, putative;
n=5; Trypanosomatidae|Rep: 60S acidic ribosomal protein,
putative - Leishmania major
Length = 227
Score = 46.4 bits (105), Expect = 5e-04
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 3/156 (1%)
Frame = +3
Query: 48 TQSKMGREDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMG 227
TQ+K RED K +I + L++Y + N+ + +QQIR G S + +G
Sbjct: 15 TQAKT-RED----KDKLIERIREALEDYSDVYTFQLHNIRTNILQQIREERAGDSRIFLG 69
Query: 228 KNTMMRKAIKDHLET--NPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPG 401
N +M AI E+ L KL P + G G +FT +V++ AR G
Sbjct: 70 NNKVMMIAIGRDEESAQRQNLHKLSPFLTGLCGLLFTNLSKKEVKEYFATVGAPVYARTG 129
Query: 402 AIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISR 506
A S+V+ P L +P K+ R
Sbjct: 130 QTATESLVLKGGPLPQFPHSMFDHLAKLGLPIKLDR 165
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 46.0 bits (104), Expect = 7e-04
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Frame = +3
Query: 66 REDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGH-SIVLMGKNTMM 242
RE WK ++ + L E ++ + + + R R + + KN ++
Sbjct: 13 REKFPEWKVKLVNEVKEKLKENDVVLVLDLVETPANLVHKFRKKFRKELPYMKVIKNNLV 72
Query: 243 RKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 422
RKA + P +++ + G+ F+FT + + K+ + + APA+PG +A +
Sbjct: 73 RKAFEQSGIEMP--KEMDEQLVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEI 130
Query: 423 VIPAHNTGLGPEK-TSFFQALSIPTKI 500
V+PA +TGL P S F L I T +
Sbjct: 131 VVPAGDTGLTPGPILSTFGKLKIKTMV 157
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -2
Query: 472 KKEVFSGPR--PVL*AGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPTFPLM* 299
++ +F R PVL G T A P RAGA TL+ + S TS +SP VK PT P
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 298 GSSFSRAGF 272
G+ + GF
Sbjct: 66 GTRLRKTGF 74
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 44.4 bits (100), Expect = 0.002
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Frame = +3
Query: 66 REDNATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMR 245
++ + WKS ++ L E ++ +N+ + +++R + + +G N ++R
Sbjct: 16 KKKDREWKSTLIERVRDALSERSSVYVFKYENMRNGTFKEMRAATEATTTFFVGSNKVLR 75
Query: 246 KAI-KD-HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
A+ +D E + L +KG+ G +FT DV V+ AR GA+A +
Sbjct: 76 VALGRDAESEASEGAATLGARVKGDCGVMFTNLSREDVESVFERFAVKDYARTGALARET 135
Query: 420 VVI---PAHN-TGLGPEKT--SFFQALSIPTKISR 506
V + P H +G E T + +PTK++R
Sbjct: 136 VTVEAGPVHGPSGALMEHTLEPTLRKNGMPTKLNR 170
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 44.0 bits (99), Expect = 0.003
Identities = 30/117 (25%), Positives = 59/117 (50%)
Frame = +3
Query: 105 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPAL 284
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+ D L +
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL-DALGGD--Y 74
Query: 285 EKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 455
KL ++ + + + + + + KV +P +P ++P+ VV+ T + P
Sbjct: 75 LKLKDYLGDQIAIITADENPFRLFRMIEDTKVPSPLKPNQVSPVDVVVNEGPTPIPP 131
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 42.3 bits (95), Expect = 0.008
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHL 266
K+N ++ +D+Y FI N+ S + IR + +S GKN ++ A+
Sbjct: 23 KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQK 82
Query: 267 ETNPA--LEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 431
A L K +KG G +FT +V + E + AR G +A +VV+P
Sbjct: 83 SDEYANQLHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLP 139
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 41.1 bits (92), Expect = 0.019
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Frame = +3
Query: 144 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 323
I + ++ +Q+IR +R + + + K ++ +A+K+ + A E L +
Sbjct: 25 IANIRGIPTRDLQRIRKEVRNLANMRVSKKRLIIRALKETGYEDLANE-LEKEKEVTALL 83
Query: 324 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTK 497
+ T ++ + +E+KV P + G IAP +VIP N +GP +T +AL + TK
Sbjct: 84 LSTNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTK 142
Query: 498 IS 503
++
Sbjct: 143 VT 144
>UniRef50_UPI0000ECA2B0 Cluster: mRNA turnover protein 4 homolog.;
n=3; Gallus gallus|Rep: mRNA turnover protein 4 homolog.
- Gallus gallus
Length = 249
Score = 40.3 bits (90), Expect = 0.032
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 260
K ++ + +D Y FI N+ + +++ +R + + HS + GKN +M A+ +
Sbjct: 30 KQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGREP 88
Query: 261 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSV 422
E L ++ H++G VG +FT +V + K AR G A +V
Sbjct: 89 SSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTV 142
>UniRef50_Q4PHU5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 315
Score = 39.1 bits (87), Expect = 0.075
Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +3
Query: 87 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAI--KD 260
K+N K+ EYP +I+G ++ + ++++R +G S + GK ++ A+ +
Sbjct: 23 KANLIDKVRDAAQEYPYVWILGHHSMRNNYLKEVRDLWKG-SKIFFGKLKVLALALGMTE 81
Query: 261 HLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP 431
E + + + G+VG +FT +V D + + AR G+ A ++ +P
Sbjct: 82 EEEVRTGISGISQRLSGDVGLLFTESPPAEVIDWFKDYQRVDFARGGSKATETIELP 138
>UniRef50_A3ZT33 Cluster: Protein disulfide-isomerase-like protein;
n=1; Blastopirellula marina DSM 3645|Rep: Protein
disulfide-isomerase-like protein - Blastopirellula
marina DSM 3645
Length = 717
Score = 33.9 bits (74), Expect = 2.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 492 WGWKEPGRKKSSQDQGQCYERE*RQTMEQW-LQDEPGLGLCSPT 364
W W+ P ++Q Q +ER + +E W Q +P LG SP+
Sbjct: 422 WSWRLPDSASAAQKQALTHERRRQALLESWTAQPQPSLGGKSPS 465
>UniRef50_Q3BXL0 Cluster: TonB-dependent outer membrane receptor
precursor; n=10; Xanthomonas|Rep: TonB-dependent outer
membrane receptor precursor - Xanthomonas campestris pv.
vesicatoria (strain 85-10)
Length = 889
Score = 33.5 bits (73), Expect = 3.7
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 36 SPYFTQSKMGREDNATWKSNYFVKIIQLLDEYPKCFIVGAD-NVGSQQMQQIRISLRGHS 212
SPY+ Q K N W+S YF +I +L + D + G Q +++R++L +
Sbjct: 796 SPYYEQGKWSARVNLGWRSEYFTQIGRLNGQQMTDAFTQVDASFGYQATERLRVALEATN 855
Query: 213 IV 218
++
Sbjct: 856 LL 857
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 33.1 bits (72), Expect = 4.9
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +3
Query: 114 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGH--SIVLMGKNTMMRKAIKDH 263
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQH 217
>UniRef50_Q4TAP6 Cluster: Chromosome undetermined SCAF7271, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7271,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 145
Score = 32.7 bits (71), Expect = 6.5
Identities = 15/28 (53%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 310 EMLALS-SPVEILLMCVINCWRTKSKPR 390
+ LAL+ +PV++LL CV+ CW T S+PR
Sbjct: 74 QALALALAPVQLLLACVLTCW-TGSRPR 100
>UniRef50_UPI00005874CE Cluster: PREDICTED: similar to
OTTHUMP00000029908; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to OTTHUMP00000029908
- Strongylocentrotus purpuratus
Length = 379
Score = 32.3 bits (70), Expect = 8.6
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 231 NTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIA 410
N M+K I+ H+E N ALE ++ +K +V + T + DVR ++ + + +
Sbjct: 307 NITMKKEIEGHIEENEALETIIQQLKEDVKSMST-DPISDVRKQMFPHLYKEVQKCTPDM 365
Query: 411 PLSVVIPAHN 440
+ + IP H+
Sbjct: 366 DVELDIPRHD 375
>UniRef50_A5BI07 Cluster: Putative uncharacterized protein; n=6;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 1803
Score = 32.3 bits (70), Expect = 8.6
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = -1
Query: 458 LRTKASVMSGNDDRQWSNGSRTSRGLDFVLQQFITHINKISTGEDKANISLDVRKQFFES 279
L+ KA + N R S + T+ +F+ + F TH +N S ++F+E
Sbjct: 100 LKDKAKIWL-NSLRPRSIRTWTNLQAEFLKKFFPTHRTN-GLKRQISNFSAKENEKFYEC 157
Query: 278 WICFKMVLDGFPHHG 234
W + ++ FPHHG
Sbjct: 158 WERYMEAINAFPHHG 172
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,584,587
Number of Sequences: 1657284
Number of extensions: 13565328
Number of successful extensions: 40276
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 38791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40240
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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