Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L06
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   1.0  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    23   1.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.1  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.1  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.1  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   4.1  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   7.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.1  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   9.4  

>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 122 HSEDIRNRVNDKPGFSEENSKH 187
           H   + N ++DK GF+  NS H
Sbjct: 75  HKLKLTNNISDKHGFTILNSMH 96


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 110 VRLKPSRVLVWLQN 69
           +RL P++V +W QN
Sbjct: 77  IRLTPTQVKIWFQN 90


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -2

Query: 276 TSVPLIFTVAFSVVTLLSFVDFDTSGFVDMCFEFSSLK-PGLSLTRFLMSSECV 118
           TS+P+++   F VVT +  V      F  +  +  +L+ P LS    ++S  C+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLSTLIIIISLGCL 137


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -2

Query: 276 TSVPLIFTVAFSVVTLLSFVDFDTSGFVDMCFEFSSLK-PGLSLTRFLMSSECV 118
           TS+P+++   F VVT +  V      F  +  +  +L+ P LS    ++S  C+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLSTLIIIISLGCL 137


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -2

Query: 276 TSVPLIFTVAFSVVTLLSFVDFDTSGFVDMCFEFSSLK-PGLSLTRFLMSSECV 118
           TS+P+++   F VVT +  V      F  +  +  +L+ P LS    ++S  C+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLSTLIIIISLGCL 137


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -1

Query: 439 FRYKSLKLVKYGFYPNNYLTLSLSYLVFFNTFPVY 335
           + Y SL  +     P   LTLS  Y    + FP Y
Sbjct: 143 YSYISLITMAIQNSPQKMLTLSEIYQFIMDLFPFY 177


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 321 VGHWSPVNDDLSSNVTSVPL 262
           + +  PVNDD+ S  T  PL
Sbjct: 79  LSYGGPVNDDVRSPGTPGPL 98


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 321 VGHWSPVNDDLSSNVTSVPL 262
           + +  PVNDD+ S  T  PL
Sbjct: 235 LSYGGPVNDDVRSPGTPGPL 254


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = -1

Query: 439 FRYKSLKLVKYGFYPNNYLTLSLSYLVFFNTFPVY 335
           + Y +L ++     P   LTL+  Y      FP Y
Sbjct: 86  YSYNALIMMAIRNSPEKRLTLNGIYEYIMRNFPYY 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,043
Number of Sequences: 336
Number of extensions: 2024
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)