Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L06
(454 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11653| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.45
SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.78
SB_8491| Best HMM Match : LicD (HMM E-Value=0.0094) 30 0.78
SB_9386| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2) 30 1.0
SB_9868| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_11654| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 2.4
SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4) 29 2.4
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 28 3.1
SB_20425| Best HMM Match : EGF_CA (HMM E-Value=1.2e-20) 28 3.1
SB_56700| Best HMM Match : rve (HMM E-Value=1.1e-11) 28 4.2
SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_20537| Best HMM Match : Vicilin_N (HMM E-Value=2.6) 28 4.2
SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20) 28 4.2
SB_1060| Best HMM Match : Tropomyosin (HMM E-Value=8.5) 28 4.2
SB_22527| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18) 27 5.5
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 27 5.5
SB_56832| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17) 27 5.5
SB_25410| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054) 27 5.5
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 27 5.5
SB_14084| Best HMM Match : DUF1531 (HMM E-Value=0.11) 27 7.3
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 27 7.3
SB_29613| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_7576| Best HMM Match : JTB (HMM E-Value=2.8) 27 7.3
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 27 9.6
SB_10756| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21) 27 9.6
SB_3739| Best HMM Match : Pkinase (HMM E-Value=0) 27 9.6
>SB_11653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1867
Score = 31.1 bits (67), Expect = 0.45
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 330 TYPVGHWSPVNDDLSSNVTSVPLIFTVAFSVVTLLSFVDFDTSGF 196
T VG W+ V+ + +TS + T+ F V T+L + + G+
Sbjct: 1160 TLAVGQWTTVDTPVREVITSTAAVCTLLFVVDTILKLIAYTVRGY 1204
>SB_53412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 30.3 bits (65), Expect = 0.78
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +2
Query: 11 IREISRELQQSTDEGKRETYFVTTPKL-AMASNG--PNQTHSEDIRNRVNDKPGFSEENS 181
+R R++++STD GK + ASN P++T+ D + G S +N
Sbjct: 382 LRAAERKMRKSTDSGKTNKKAKRSHSSDVQASNSASPDKTNVSDESLIAVVEAGKSSKNI 441
Query: 182 KHISTKPDVSKSTNESKVTTEKAT 253
+ DVS S KVT+E+ +
Sbjct: 442 EASEISADVSDSAFTGKVTSERVS 465
>SB_8491| Best HMM Match : LicD (HMM E-Value=0.0094)
Length = 289
Score = 30.3 bits (65), Expect = 0.78
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Frame = +2
Query: 110 PNQTHSEDIRNRVN--DKPGFSEENSKHISTKPDVSKSTNESKVTTEKATVNINGTEVT- 280
P TH+++ + N DK + EN K T K+ +++ ++ + NG V
Sbjct: 4 PKSTHTKNTQADTNNEDKETKNAEN-KGTDTGNTHIKAIKYTEIPPQQIDIE-NGHIVRG 61
Query: 281 FDERSSFT------GDQCPTGYVRINGKC 349
F + SF G+ CPT YV + GKC
Sbjct: 62 FVDGKSFCSLSFDYGEMCPTSYVELGGKC 90
>SB_9386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Frame = +2
Query: 149 NDKPGFSEENSKHISTKPDVSKSTNESK------VTTEKATVNINGTE 274
N P + E+ K + +P V ++ N++K +TT T INGTE
Sbjct: 61 NTDPNWIEQLQKSVKQEPKVGQNGNKTKHESNSEITTRNTTNEINGTE 108
>SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2)
Length = 252
Score = 29.9 bits (64), Expect = 1.0
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 95 MASNGPNQTHSEDIRNRVNDKPGFSEENSKHISTKPDVSKSTNESKVTTEKATVNINGTE 274
+A+ P + ++I+ +DK FSE K S ++ K TTE + + +
Sbjct: 56 LAAKDPISSQQDEIKGNCDDKVKFSENTEK--SDNETEQQNKESGKDTTENSCTHAGPEK 113
Query: 275 VTFDERS-SFTGDQCPTGYVRINGK 346
+T S FT ++ Y++I +
Sbjct: 114 MTPSGVSHKFTDEKSKAEYLKIKSE 138
>SB_9868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.9 bits (64), Expect = 1.0
Identities = 17/77 (22%), Positives = 31/77 (40%)
Frame = +2
Query: 20 ISRELQQSTDEGKRETYFVTTPKLAMASNGPNQTHSEDIRNRVNDKPGFSEENSKHISTK 199
ISR +Q + PK A +++ S +RN P +S N ++
Sbjct: 353 ISRTHRQVASAPSERKQLIRPPKSAQSTSSAMSRRSRKLRNPRPYSPVYSNINYNDVADS 412
Query: 200 PDVSKSTNESKVTTEKA 250
P + +++ V +KA
Sbjct: 413 PQTPATPSQANVADKKA 429
>SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +2
Query: 38 QSTDEGKRET----YFVTTPKLAMASNGPNQTHSEDIRNRVNDKPGFSEENSKHISTKPD 205
QS GKR+ Y P + ++NG + HS DI + ND+ +E S S+K
Sbjct: 81 QSEHVGKRKQGVVGYHALEPVVGPSTNGQKERHSYDILKKTNDEVRGAESKSGD-SSKAG 139
Query: 206 VSKSTNESKVTTEKATVNING 268
S ++ KV +K + G
Sbjct: 140 -SFKIDDDKVKDQKWDGRLGG 159
>SB_11654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -2
Query: 330 TYPVGHWSPVNDDLSSNVTSVPLIFTVAFSVVTLLSFVDFDTSGF 196
T VG W+ V+ + +TS + T+ F + T+L + + G+
Sbjct: 846 TLAVGQWTTVDAPVREVITSTAAVCTLLFVIDTILKVIAYTGPGY 890
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 47 DEGKRETYFVTTPKLAMASNGPNQTHSEDIRNRVNDKPGFSEENSKHISTKP 202
DEG+ ++ TPK + +NG + ++ + + + GFS++ S P
Sbjct: 924 DEGQGDSPVSKTPKTTLVANGKSPSNKRNRKGSLKCIGGFSDQTDADFSYLP 975
>SB_25509| Best HMM Match : PWP2 (HMM E-Value=4.4)
Length = 582
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 95 MASNGPNQTHSEDIRNRVNDKPGFSEENSKHISTK-PDVSKSTNESK 232
++SNGP+ + ED N+KP +EE S HIS+ P +S+ + K
Sbjct: 192 ISSNGPSIS-GED----TNNKPSMAEEVSCHISSNGPSISREDTDIK 233
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 98 ASNGPNQTHSEDIRNRVNDKPGFSEENSKHISTKPDVS--KSTNESKVTTEKATVNIN 265
+SNGP+ T ED N KP +EE S HIS+ ++ + TN E+ + +I+
Sbjct: 89 SSNGPS-TSGED----TNIKPSMAEEVSCHISSNGPITSGEDTNIKPSMAEEVSFHIS 141
Score = 27.1 bits (57), Expect = 7.3
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 95 MASNGPNQTHSEDIRNRVNDKPGFSEENSKHISTK-PDVS-KSTNESKVTTEKATVNI-- 262
++SNGP+ + + N KP +EE S HIS+ P S + TN E+ + +I
Sbjct: 140 ISSNGPSTSGGD-----TNIKPSMAEEVSFHISSNGPSTSGEDTNIKPSMAEEVSCHISS 194
Query: 263 NGTEVTFDERSS 298
NG ++ ++ ++
Sbjct: 195 NGPSISGEDTNN 206
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +2
Query: 110 PNQTHSEDIRNRVNDKPGFSEENSKHISTKPDVSKSTNESKVTTEKATVNING 268
P + H D +D P + KH S D + K EK+ V+ +G
Sbjct: 581 PEKKHHTDSNKHHSDSPTNKKHKHKHSSPSQDEAADGKNKKSVQEKSVVDKSG 633
>SB_20425| Best HMM Match : EGF_CA (HMM E-Value=1.2e-20)
Length = 144
Score = 28.3 bits (60), Expect = 3.1
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 314 CPTGYVRINGKC 349
CP+GY+R+NG C
Sbjct: 78 CPSGYIRVNGVC 89
>SB_56700| Best HMM Match : rve (HMM E-Value=1.1e-11)
Length = 1140
Score = 27.9 bits (59), Expect = 4.2
Identities = 26/101 (25%), Positives = 40/101 (39%)
Frame = -2
Query: 345 FPFILTYPVGHWSPVNDDLSSNVTSVPLIFTVAFSVVTLLSFVDFDTSGFVDMCFEFSSL 166
FP L+ +PV DL S+VT ++ T A + + + S F M S+
Sbjct: 215 FPIALSPLPTPLAPVESDLPSDVTMAAIVVTTANPIAVTVK-PSWTRSVFSWMTASISAT 273
Query: 165 KPGLSLTRFLMSSECV*LGPFEAIASFGVVTKYVSRFPSSV 43
P SL ++ C PF + V +SR S +
Sbjct: 274 DPIASLKPLSFATSCR-TPPFSLNSCLSEVQPPLSRLRSCI 313
>SB_28852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3172
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 17 EISRELQQSTDEGKRETYFVTTPKLAMASNGPNQ-THSEDIRNRVNDKPGFSEENSKHIS 193
E +R++ +++E +RETY V TP+ P + ++ ++D P ++ ++
Sbjct: 575 EEARQIDLNSEE-RRETYVVGTPRRETMPVAPKVISDCIPLKPAIDDDPVEDNADTPDVA 633
Query: 194 TKPDVSKSTNESKVTTEKATVNIN 265
+ S + + T+K V+++
Sbjct: 634 EESKPLPSAEDGECVTQKVCVHLD 657
>SB_20537| Best HMM Match : Vicilin_N (HMM E-Value=2.6)
Length = 624
Score = 27.9 bits (59), Expect = 4.2
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 41 STDEG-KRETYFVTTPKL-AMASNGPNQTHSEDIRNRVNDKPGFSEENSKHISTKPDVSK 214
+TD G K+ Y KL + + ++ S D + N + +EN + IST+P V
Sbjct: 338 NTDLGNKKPEYDQAKEKLDTIEKDTLHEETSRDTQQMDNQEKYNPQENIRIISTQPTVDA 397
Query: 215 STNESKVTTEKATVNINGTEVTFDE 289
+ + T +A NI VT++E
Sbjct: 398 HAKDLQETDTRAH-NIKEDMVTYEE 421
>SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20)
Length = 1362
Score = 27.9 bits (59), Expect = 4.2
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +2
Query: 2 EADIREISRELQQSTDEGKRETYFVTTPKLAMASNGPNQTHSEDIRNRVNDKPGFSEENS 181
+ +I+EIS++ Q STDE E +L N +T +E I N + F S
Sbjct: 273 DMEIQEISKKCQASTDE--NEKLRRENEELRTVMNEYERTMAEMIENGKKSQTMFDNSKS 330
Query: 182 KHISTKPDVSKSTN 223
+ I + + N
Sbjct: 331 EVIKERDQLQADLN 344
>SB_1060| Best HMM Match : Tropomyosin (HMM E-Value=8.5)
Length = 430
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 122 HSEDIRNRVNDKPGFSEENSKHISTKPD 205
H + + +N+KPG + S+H++ KPD
Sbjct: 340 HLNKMPDHLNNKPGNLNKMSEHLNNKPD 367
>SB_22527| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 27.9 bits (59), Expect = 4.2
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 6 PTSEKLVGSCNNLRTKGNAKHIL*PHQNSRWLQTDLIKHIPKTSETVLTTNRASV 170
P E+ V NLR GN KH+ + ++ L + P TS L N+ +V
Sbjct: 470 PAPERYVVRVRNLRYLGNPKHVAVAAKENKTLTN--ATNDPSTSNETLAINQTNV 522
>SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18)
Length = 1067
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -2
Query: 297 DDLSSNVTSVPLIFTVAFSVVTLLSFVDFDTSG 199
+D++++++ V L F S L +F+D DTSG
Sbjct: 296 NDVTTHLSVVELPFGNCHSTFALTTFIDIDTSG 328
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +2
Query: 104 NGPNQTHSEDIRNRVNDKPGFSEENSKHISTKPDVSKSTNESKVTTEKATVNINGTEVTF 283
NGP T+ + + D G S + K + KP V ++ +KA+ ++N T
Sbjct: 651 NGPPPTYQVTLTFIIMDSLGASAQIEKQVKVKP-VQADKKATQELVDKASRDVNSMLNTG 709
Query: 284 DERSS 298
D R +
Sbjct: 710 DVRKA 714
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +2
Query: 107 GPNQTHSEDIRNRVNDKPGFSEENSKHISTKPDVSKSTNESKVTTEKATVNINGTEVTFD 286
G ++ +E I+ N K + + +TK D++++ + V G+E F
Sbjct: 126 GYSKEQAEVIQRLKNAKDHYERLGIQQGATKDDINRAYKKLAVLIHPDKSVAPGSEEAFK 185
Query: 287 ERSSFTGDQCPTGYVRINGK 346
SS Q TGY I +
Sbjct: 186 ALSSLNYGQMATGYPSIQSR 205
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 98 ASNGPNQTHSEDIRNRV-----NDKPGFSEENSKHISTKPDVSKSTNESKVTTEKATVNI 262
A+ G N+ H R + NDK + N+K + + N SK E+ NI
Sbjct: 214 ATEGRNEKHMPSAREILPDSNDNDKLNYIINNTKEDTFISPRNPPENTSKAFPEEIKRNI 273
Query: 263 NGTEVTFDERSSFTGDQCPT 322
+ +E+ +D+ + D+ T
Sbjct: 274 DESEMDYDKGINLKQDEAST 293
>SB_56832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 27.5 bits (58), Expect = 5.5
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 161 GFSEENSKHISTKPDVSKSTNESKVTTEKATVNINGTEVTFDERSSFTGDQCPTGY-VRI 337
G + + KH+STK + + T TTE + + GT+ + + + P GY R
Sbjct: 91 GSNGQTQKHLSTKAYLIEKTETQGNTTEPCPLEMEGTQRKKYDGVEYLAEP-PKGYCFRR 149
Query: 338 NGKC 349
G C
Sbjct: 150 TGIC 153
>SB_26663| Best HMM Match : Telo_bind (HMM E-Value=1.8e-17)
Length = 1086
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 143 RVNDKPGFSEENSKHISTKPDVSK-STNESKVTTEK 247
+ ND+PG S N+ KPD+SK S N + V K
Sbjct: 398 KFNDQPGTSSRNTGLEQEKPDISKYSRNGTGVERPK 433
>SB_25410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 311 QCPTGYVRINGKCVEED 361
QCP G+VR+N C + D
Sbjct: 4 QCPAGWVRLNRSCYKAD 20
>SB_21715| Best HMM Match : Serglycin (HMM E-Value=0.054)
Length = 1079
Score = 27.5 bits (58), Expect = 5.5
Identities = 20/85 (23%), Positives = 33/85 (38%)
Frame = +2
Query: 11 IREISRELQQSTDEGKRETYFVTTPKLAMASNGPNQTHSEDIRNRVNDKPGFSEENSKHI 190
+ EI E + + G E+ V K A NGP Q N +ND P + ++
Sbjct: 970 MEEIFEEDEMDENNGDEESEDVGNMKKEEAENGPKQVLQH--TNELND-PNRNSRREQNK 1026
Query: 191 STKPDVSKSTNESKVTTEKATVNIN 265
K K ++ ++K + N
Sbjct: 1027 RNKAKKGKQVGQNNTKSKKRKIRKN 1051
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 27.5 bits (58), Expect = 5.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 149 NDKPGFSEENSKHISTKPDVSKSTNESKVTTEKATVNINGT 271
N KP + NSK + + N SK TT VN+N T
Sbjct: 3127 NSKPT-TNNNSKPTTNNNSKPTTNNNSKPTTNNKKVNLNNT 3166
>SB_14084| Best HMM Match : DUF1531 (HMM E-Value=0.11)
Length = 413
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 123 IPKTSETVLTTNRASVKKIQNTYQRNLMCQNQRT 224
+P T E +LTT+ ASV++ N R L + + T
Sbjct: 184 VPDTDEPLLTTSPASVQQSLNNILRKLQDKRRAT 217
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 27.1 bits (57), Expect = 7.3
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 2 EADIREISRELQQSTDEGKRETYFVTTPKLAMASNGPNQTHSEDIRNRVNDKPGFSEENS 181
E D+ I R + G +E +T N N+ EDI VND F++E+
Sbjct: 1174 EIDVNGILRVSAEDKGTGNKEKITIT--------NDQNRLTPEDIERMVNDAEKFADEDK 1225
Query: 182 K 184
K
Sbjct: 1226 K 1226
>SB_29613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 30 SCNNLRTKGNAKHIL*PHQNSRWLQTDLIKHIPKTSE 140
SC L GNA +L N W+ D ++ PK E
Sbjct: 6 SCTMLGDDGNALAVLSSSGNDDWISVDYVQADPKGPE 42
>SB_7576| Best HMM Match : JTB (HMM E-Value=2.8)
Length = 261
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 30 SCNNLRTKGNAKHIL*PHQNSRWLQTDLIKHIPKTSE 140
SC L GNA +L N W+ D ++ PK E
Sbjct: 13 SCTMLGDDGNALAVLSSSGNDDWISVDYVQADPKGPE 49
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/62 (24%), Positives = 27/62 (43%)
Frame = +2
Query: 110 PNQTHSEDIRNRVNDKPGFSEENSKHISTKPDVSKSTNESKVTTEKATVNINGTEVTFDE 289
PN HS+D + DK S + +S D++ +N + ++K N + + E
Sbjct: 1777 PNAEHSKDTNASIKDKKKLSAKFVNVVSNLKDMTPLSNSTSGDSKKQPGNGSDDNIKHIE 1836
Query: 290 RS 295
S
Sbjct: 1837 ES 1838
>SB_10756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 26.6 bits (56), Expect = 9.6
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Frame = +2
Query: 128 EDIRNRVNDKPGFSEENSKHISTKPDVSKS-TNESK------VTTEKATVNINGTEVTFD 286
E I V +PG +N K+ KP++S + ++E+K V+ T + NG++V
Sbjct: 551 EVIPEIVKKEPGMENDNEKNGRIKPEMSDTKSDETKTFAGQEVSKATMTTDANGSDVAKK 610
Query: 287 ERSS------FTGDQCPTGYVRIN 340
SS +T D C + R N
Sbjct: 611 PTSSASRKYRYTCDVCLKSFSRSN 634
>SB_45836| Best HMM Match : EGF (HMM E-Value=6.7e-21)
Length = 1332
Score = 26.6 bits (56), Expect = 9.6
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Frame = +2
Query: 8 DIREISRELQQSTDEGKRETYFVTTPKLAMASNGPNQTHSEDIRNRVNDKPGFSEENSKH 187
DIR L E + FVT S+ S + N +N++P + +
Sbjct: 689 DIRVCDNALYLPPGEEPAPSSFVTVRNPCYGSSAGAVPKSRKVSNVLNERPKGTSDLKTG 748
Query: 188 ISTKPDVSKSTNESKVTTE-KATVNINGTEVTFDE 289
D KS ++ + + K +++ G E +DE
Sbjct: 749 KKFPQDAQKSRDDYETIDDIKKSISSRGDEEDWDE 783
>SB_3739| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 490
Score = 26.6 bits (56), Expect = 9.6
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 110 PNQTHSEDIRNRVNDKPGFSEENSKHI--STKPDVSKSTNESKVTTEKA 250
PN+ H E+ R+ G+ EE KH T+P +S++ +T+ A
Sbjct: 127 PNREHRENERHNRPYSQGYHEEERKHSLHRTRPYQRESSDYGSGSTDSA 175
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,619,344
Number of Sequences: 59808
Number of extensions: 239236
Number of successful extensions: 1031
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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