Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0001_L05
(366 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32805| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-06
SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21) 45 2e-05
SB_59700| Best HMM Match : SCP (HMM E-Value=1.6e-14) 40 6e-04
SB_7378| Best HMM Match : SCP (HMM E-Value=3.3e-29) 40 8e-04
SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23) 39 0.001
SB_7926| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_6144| Best HMM Match : SCP (HMM E-Value=4.6e-38) 38 0.002
SB_43926| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_57943| Best HMM Match : SCP (HMM E-Value=5.70048e-42) 38 0.003
SB_887| Best HMM Match : SCP (HMM E-Value=7.1e-25) 36 0.008
SB_22061| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.013
SB_17372| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.018
SB_50769| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.023
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.023
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 35 0.023
SB_17882| Best HMM Match : ShTK (HMM E-Value=1e-05) 35 0.023
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 34 0.041
SB_3100| Best HMM Match : SCP (HMM E-Value=1.5e-20) 33 0.071
SB_54432| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.16
SB_47687| Best HMM Match : SCP (HMM E-Value=1.8e-16) 32 0.16
SB_48967| Best HMM Match : SCP (HMM E-Value=8.3e-06) 31 0.22
SB_49419| Best HMM Match : SCP (HMM E-Value=5e-14) 31 0.22
SB_41526| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.50
SB_48716| Best HMM Match : Galactosyl_T (HMM E-Value=1.2) 29 0.87
SB_37501| Best HMM Match : SCP (HMM E-Value=1.2e-19) 29 1.2
SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.5
SB_57379| Best HMM Match : SCP (HMM E-Value=5.8e-19) 28 2.7
SB_8600| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_8749| Best HMM Match : SCP (HMM E-Value=4.9e-16) 28 2.7
SB_5218| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.7
SB_8658| Best HMM Match : SCP (HMM E-Value=3e-20) 27 3.5
SB_576| Best HMM Match : RVT_1 (HMM E-Value=0) 27 4.7
SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_21899| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_12270| Best HMM Match : Big_2 (HMM E-Value=8.1) 27 6.2
SB_32491| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_7239| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.2
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0) 26 8.1
SB_31040| Best HMM Match : PAN (HMM E-Value=0.00021) 26 8.1
>SB_32805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 48.0 bits (109), Expect = 2e-06
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +1
Query: 67 IGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 210
IGH+TQ+ W +T VG V + W K Y+V Y AGN QS Y
Sbjct: 169 IGHFTQIVWKSTTEVGVGVAKAIVDGWTKTYIVARYRTAGNVKGQSHY 216
>SB_13248| Best HMM Match : SCP (HMM E-Value=2.6e-21)
Length = 631
Score = 45.2 bits (102), Expect = 2e-05
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Frame = +1
Query: 10 KDYKYAPLKQSDFDKSKPK-----IGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNY 174
KD+ Y ++ DF+K K + H+TQ+ W ++T VG A + NKFY V Y
Sbjct: 292 KDW-YDEIRDYDFNKGAGKDMWSVVLHFTQVVWRDTTEVGMATAVSLVT--NKFYTVARY 348
Query: 175 GPAGNYIDQSPYKAGKP 225
PAGN + +K P
Sbjct: 349 KPAGNQGTKDDFKENVP 365
>SB_59700| Best HMM Match : SCP (HMM E-Value=1.6e-14)
Length = 427
Score = 39.9 bits (89), Expect = 6e-04
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 4 RGKDYKYA-PLKQSDFDKSKPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGP 180
+G Y Y+ P SD D +TQ+ W ES VG Q + N+ YVV Y P
Sbjct: 329 QGSHYSYSDPRLNSDTDS-------FTQLVWKESRDVGMGCAQRKGTVTNEIYVVALYYP 381
Query: 181 AGN 189
AGN
Sbjct: 382 AGN 384
>SB_7378| Best HMM Match : SCP (HMM E-Value=3.3e-29)
Length = 264
Score = 39.5 bits (88), Expect = 8e-04
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYID 198
GH+TQM W S +G +T D + YVV Y PAGN ++
Sbjct: 213 GHFTQMVWKGSKELGMGRAKTSDGRCT--YVVARYQPAGNIVN 253
>SB_27401| Best HMM Match : SCP (HMM E-Value=9e-23)
Length = 1105
Score = 38.7 bits (86), Expect = 0.001
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +1
Query: 22 YAPLKQSDFDKSKPKIG--HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNY 192
Y + + DF P+ G H+TQM W S +G + + + YVV Y P GN+
Sbjct: 615 YNEVCKYDFASGGPQPGANHFTQMVWKGSKKIGIGIAKKSEMTGTCAYVVVRYYPQGNF 673
>SB_7926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYKAGKPSGQLV 240
GH+TQ+ W S +G A +++ Y V Y PAGN I Q P KP G V
Sbjct: 63 GHFTQVVWVGSQEMGVAKAVSKN---GAHYAVARYYPAGNVIGQFPENV-KPKGSKV 115
Score = 35.5 bits (78), Expect = 0.013
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYKAGKPSG 231
GH+TQ+ W+ ST +G + +VV Y P GN + Q P +G
Sbjct: 240 GHFTQVVWAGSTEMGAGKATSSS---GAHFVVARYTPPGNVMGQFPENVKPKTG 290
>SB_6144| Best HMM Match : SCP (HMM E-Value=4.6e-38)
Length = 468
Score = 38.3 bits (85), Expect = 0.002
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 13 DYKYAPLKQSDFDKSKPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNY 192
D Y + DF+ +P IG ++Q+ W ST +G + R + Y V Y P GNY
Sbjct: 199 DSWYKDVCNYDFNAHQPVIGLFSQLVWKSSTSLGIGRSRGNYRGFACTYWVAVYKPPGNY 258
Score = 37.9 bits (84), Expect = 0.002
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 22 YAPLKQSDFDKSKPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNY 192
Y + DF+ +P IG ++Q+ W ST +G + R + Y V Y P GNY
Sbjct: 2 YKDVCNYDFNTHQPVIGLFSQLVWKSSTSLGIGRSRGNYRGFACTYWVAVYKPPGNY 58
>SB_43926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 85 MAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 210
+ W +T VG V + W K Y+V Y AGN I QS Y
Sbjct: 1 IVWKSTTEVGVGVAKAIVGGWTKTYIVARYRTAGNAIGQSHY 42
>SB_57943| Best HMM Match : SCP (HMM E-Value=5.70048e-42)
Length = 632
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 13 DYKYAPLKQSDFDKS--KPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAG 186
D Y + DF K + GH+TQ+ W ++ G Q +D K +VV Y PAG
Sbjct: 74 DKWYNEVNNYDFGKPGFQSNTGHFTQVVWRDTEEFGVGKAQGED---GKIFVVGRYRPAG 130
Query: 187 N 189
N
Sbjct: 131 N 131
>SB_887| Best HMM Match : SCP (HMM E-Value=7.1e-25)
Length = 147
Score = 36.3 bits (80), Expect = 0.008
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 13 DYKYAPLKQSDFDKS--KPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAG 186
D Y+ + + FDK + GH+TQ+ W + V A + D +VV Y PAG
Sbjct: 77 DEWYSEISKYKFDKPGWQSGTGHFTQVVWKGTKEVAMASAEGAD---GSVFVVGRYKPAG 133
Query: 187 NYIDQ 201
N + Q
Sbjct: 134 NVLSQ 138
>SB_22061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 35.5 bits (78), Expect = 0.013
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 1 ARGKDYKYAPLKQSDFDKSKPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGP 180
A G++Y ++ + S PK +TQ+ W S +G +D Q N YVV Y P
Sbjct: 799 AEGQNYSFSDPRLS------PKTDAFTQVVWKSSKKLGMGC--ARDLQTNDLYVVALYDP 850
Query: 181 AGN 189
GN
Sbjct: 851 MGN 853
>SB_17372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 35.1 bits (77), Expect = 0.018
Identities = 19/62 (30%), Positives = 25/62 (40%)
Frame = +1
Query: 16 YKYAPLKQSDFDKSKPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYI 195
YK + ++ GH+TQ+ W EST +G Q W Y V Y GN
Sbjct: 287 YKEVCMYNFNYGGMSGATGHFTQLVWKESTLLGIGNAPGQYTGWPCTYWVARYREHGNMS 346
Query: 196 DQ 201
Q
Sbjct: 347 GQ 348
>SB_50769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 34.7 bits (76), Expect = 0.023
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYKAGKPSGQLVCGN 249
GH+TQ+ W ST +G + + + + + V Y GNY A + S +V GN
Sbjct: 250 GHFTQVVWKSSTKMGFGMAEGTFQNFPCVFSVARYDKPGNY-------ANRFSKNVVKGN 302
Query: 250 YD 255
+D
Sbjct: 303 FD 304
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 34.7 bits (76), Expect = 0.023
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNY 192
GH+TQ+ W+ S +G T + + V Y PAGN+
Sbjct: 948 GHFTQVVWNASVELGIGKATTTKNGTSCTFYVARYKPAGNH 988
>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
Length = 1189
Score = 34.7 bits (76), Expect = 0.023
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +1
Query: 22 YAPLKQSDFDK--SKPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGN 189
Y +K DF S P H++Q+ W + +G V + Q + N F++V Y P GN
Sbjct: 419 YQEVKNYDFKNPHSDPSTSHFSQLVWKGTKKLG--VGEAQSKSGN-FFLVARYHPKGN 473
>SB_17882| Best HMM Match : ShTK (HMM E-Value=1e-05)
Length = 387
Score = 34.7 bits (76), Expect = 0.023
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +1
Query: 82 QMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYKAG 219
++ W ++ +G A+ + + W Y+V Y P GNY + + G
Sbjct: 338 RIVWKDTRRLGVAIARIKRGLWYSTYIVARYSPPGNYNGEFTQQVG 383
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 33.9 bits (74), Expect = 0.041
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 64 KIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYKAGKPSGQ 234
K GH+TQ+ W + +G A + D +VV Y P GN + + + GQ
Sbjct: 3727 KCGHFTQLVWRGTKEIGVAKRVSAD---GTQFVVARYHPPGNVLGEFKENIKRAKGQ 3780
>SB_3100| Best HMM Match : SCP (HMM E-Value=1.5e-20)
Length = 191
Score = 33.1 bits (72), Expect = 0.071
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +1
Query: 64 KIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNY 192
+ GH+T + W ++ +G ++ + N +VV Y GN+
Sbjct: 115 RTGHFTALVWKDTKELGIGTATSKKGRMNCLWVVARYRSGGNF 157
>SB_54432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 31.9 bits (69), Expect = 0.16
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 73 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYKAGKPSGQLVCGNY 252
H+TQ+ W ST +G + YVV Y GN+ D+ Y A G +Y
Sbjct: 121 HFTQIVWKASTELGFG----SAKGTKCTYVVGRYKKRGNFGDEKDYDANVKKGSFDATSY 176
>SB_47687| Best HMM Match : SCP (HMM E-Value=1.8e-16)
Length = 600
Score = 31.9 bits (69), Expect = 0.16
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 76 YTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGN 189
+TQ+ W + G ++ D YVV Y PAGN
Sbjct: 523 FTQVVWQNTKEFGVGCARSADNSSGPVYVVALYKPAGN 560
>SB_48967| Best HMM Match : SCP (HMM E-Value=8.3e-06)
Length = 139
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGN 189
GH+TQ+ W ST +G + Y V Y AGN
Sbjct: 78 GHFTQVVWKTSTELGFGSASAEQGGMKCTYYVGRYKEAGN 117
>SB_49419| Best HMM Match : SCP (HMM E-Value=5e-14)
Length = 555
Score = 31.5 bits (68), Expect = 0.22
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGN 189
GH+TQ+ W ST +G + Y V Y AGN
Sbjct: 491 GHFTQVVWKGSTELGVGKASAEQHGMICTYHVARYKDAGN 530
>SB_41526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 30.3 bits (65), Expect = 0.50
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 7 GKDYKYAPLKQSDFDKS--KPKIGHYTQMAWSESTHVG 114
G D Y DF P GH+TQ+ W ST +G
Sbjct: 11 GVDLWYKESNNYDFQSPGYSPATGHFTQLVWKASTRMG 48
>SB_48716| Best HMM Match : Galactosyl_T (HMM E-Value=1.2)
Length = 323
Score = 29.5 bits (63), Expect = 0.87
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 95 LSPLTSDVLFCKLKIDSGINSTLYATTGRLVITSISL 205
LSP FC + + GI S+L+A L IT++++
Sbjct: 276 LSPSVKPASFCSIAVFYGITSSLFAGVSLLSITAVAV 312
>SB_37501| Best HMM Match : SCP (HMM E-Value=1.2e-19)
Length = 351
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVV 165
GH+TQ+ W EST +G ++ + Y V
Sbjct: 163 GHFTQVVWKESTELGFGSASAEEDKMKCTYYV 194
>SB_222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2323
Score = 28.7 bits (61), Expect = 1.5
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +1
Query: 67 IGHYTQMAWSESTHVGCAVLQTQDRQWNKF---YVVCNYGPAGNYIDQ 201
IGH+ + W T +GC + N + YV +Y P N D+
Sbjct: 234 IGHFQAVVWKGETKLGCGLTFKPGDPKNGYYGTYVTAHYAPPSNTGDK 281
>SB_57379| Best HMM Match : SCP (HMM E-Value=5.8e-19)
Length = 168
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +1
Query: 73 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQ 201
H+TQ+ W + +G + W +V Y PAGN+ Q
Sbjct: 127 HFTQVVWKATRRIGVGI----SGNW----IVVRYSPAGNWAGQ 161
>SB_8600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 70 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNY 192
GH+TQ+ W ST +G Q + V Y AGN+
Sbjct: 300 GHFTQVVWKGSTKLGYGKANGQYSGAECEFHVGRYKAAGNF 340
>SB_8749| Best HMM Match : SCP (HMM E-Value=4.9e-16)
Length = 369
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +1
Query: 22 YAPLKQSDFDKS--KPKIGHYTQMAWSESTHVG 114
Y +K+ DF+ GH+TQ+ W ST +G
Sbjct: 308 YNEVKKYDFNSPGFSDPTGHFTQVVWKASTELG 340
>SB_5218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.9 bits (59), Expect = 2.7
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = -3
Query: 208 RETDRCNYQPARSCIQRR-IYSTVDLEFA-----KQHIRREW 101
R++D C Y+ R C+ RR YS L FA KQ +R +W
Sbjct: 27 RQSDECLYRFTRLCLLRRGGYSRESLAFAGRVEIKQTLRGDW 68
>SB_8658| Best HMM Match : SCP (HMM E-Value=3e-20)
Length = 273
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Frame = +1
Query: 13 DYKYAPLKQSDFDKS--KPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAG 186
D Y K FD K G++TQ+ W S VG + VV + PAG
Sbjct: 125 DKWYDGSKNYSFDNPGFKRDAGNFTQLVWKSSREVGIGKAISSS---GNAVVVARFRPAG 181
Query: 187 N 189
N
Sbjct: 182 N 182
>SB_576| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1444
Score = 27.1 bits (57), Expect = 4.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 79 TQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYK 213
T+M W+ S +G A ++ + YVV Y P GN S Y+
Sbjct: 1102 TRMVWNASRQLGGA--WARNTPSGRSYVVFKYNPLGNSGGSSEYE 1144
>SB_53762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 26.6 bits (56), Expect = 6.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 226 WVCLLCRETDRCNYQPARSC 167
WVC +CR+T R N + + C
Sbjct: 157 WVCDVCRQTSRINERFSHHC 176
>SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -1
Query: 144 LSILSLQNSTSDVSGLRPCHLCVMAYFGFRLVEVTLFQGSIFVIF 10
L+++ N+T ++ + + + G RL T+F G VIF
Sbjct: 98 LALIDFLNATVNLPVFTAAGVLQLGHMGGRLASATIFAGQTLVIF 142
>SB_21899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 73 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNY 192
H+TQ+ W +T VG A + ++V Y P GN+
Sbjct: 125 HFTQIVWKSTTKVGVAKVGV--------WLVARYDPPGNW 156
>SB_12270| Best HMM Match : Big_2 (HMM E-Value=8.1)
Length = 112
Score = 26.6 bits (56), Expect = 6.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 8 VKITNMLP*NRVTSTSLN 61
VK+TN++P +RVTS ++N
Sbjct: 47 VKLTNIMPSSRVTSVTIN 64
>SB_32491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 77 THRWHGLSPLTSDVLFCKLKIDSG 148
TH WHGLS +L C L G
Sbjct: 130 THGWHGLSLQLDAILVCTLTSSCG 153
>SB_7239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 77 THRWHGLSPLTSDVLFCKLKIDSG 148
TH WHGLS +L C L G
Sbjct: 20 THGWHGLSLQLDAILVCTLTSSCG 43
>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
Length = 2442
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = -1
Query: 285 STPLAVGTFAVVVAAY*LSAGFACFVGRLIDVITSRPVVAYNVEF 151
STP A G A A S+ + FV V+TS P A F
Sbjct: 2287 STPFAFGAPATAAAVSTASSAPSAFVFGATPVVTSTPAAASGFSF 2331
>SB_31040| Best HMM Match : PAN (HMM E-Value=0.00021)
Length = 661
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 56 LNPK*AITHRWHGLSPLTSDVLFCKLKIDSGINSTLYA 169
LNP+ A + W ++P + +FC + DSG + +Y+
Sbjct: 263 LNPRAASGNYWISVNPPNAMRVFCDMTTDSGGWTLVYS 300
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,531,224
Number of Sequences: 59808
Number of extensions: 237939
Number of successful extensions: 700
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 582596255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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