Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0001_L04
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    27   0.11 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    27   0.11 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.4  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.2  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -1

Query: 474 FMSRQRSRPIVKISDNIHSFCRLIRYASTIIYSYISQNHDVVL*IVSDG*VLDDI 310
           F   ++   I +ISDN++  CRL  Y  T +   I+    V L +VS G  L D+
Sbjct: 214 FSDNKQDDKIPQISDNLYILCRL-HYKLTSVMQKINSAFSVQL-LVSIGVSLFDV 266


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 27.1 bits (57), Expect = 0.11
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -1

Query: 474 FMSRQRSRPIVKISDNIHSFCRLIRYASTIIYSYISQNHDVVL*IVSDG*VLDDI 310
           F   ++   I +ISDN++  CRL  Y  T +   I+    V L +VS G  L D+
Sbjct: 214 FSDNKQDDKIPQISDNLYILCRL-HYKLTSVMQKINSAFSVQL-LVSIGVSLFDV 266


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 307 IDVVQDLPVGDNLQDHVMILTY 372
           IDV  DLP    + D + ++TY
Sbjct: 813 IDVAYDLPALGTVLDFMSVMTY 834


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 34  SHTINNGQRHS-TLTALLNKSKKPNLFVLKNAIVTKILTENNTVLGVKVIKQGKELK 201
           +H +  G  +   L+ L+NK K+  +   +   +  I+  N  V G+K +++ + L+
Sbjct: 283 AHAVGVGNIYDRVLSELVNKMKEMKMDKTELGCLRAIILYNPDVRGIKSVQEVEMLR 339


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 310 DVVQDLPVGDNLQDHVMILTY 372
           D   D+P   N+ D + ++TY
Sbjct: 181 DAAYDVPAMSNVLDVINVMTY 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.137    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,354
Number of Sequences: 336
Number of extensions: 2685
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)